Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03755 ATGGGTTTGCAAAGCGAATTAAACGACGTGTCGTCGGGTTCGATTCCGCTGCTGGTGTTGGCGCAGATAGCCATGTGCGTCAACTACCTCCGCTCGATGCTCTTCGCGCTGTTGCAATCCCTAGGTCTCGCCCGCTTCCACACGCACCAGATCGTCGACGACCGCTTCCTCGCCGCCGTCGGATCCGGCCTCGCCGGACTCATCATGCTCTCCGATCAGCTCACCCTCAACAACCAATTATTCTTCTACGAAGGACCCGCCCACGACCACCCCTGCGTCGTCTGCCAGGCCACCTTCCAGGACGGCGACCAGCTCCGCATGCTCCCCTGCCGCCACGTCTTCCACCGCCGCTGCTTCGACGGCTGGCTCCACCACTACAAGTTCAACTGCCCCCTCTGCCGCTCCCCGCTCCTCTCCGAGGAGCGCGTGGCCCTCACCGAACGCCGCCTCGGCCAACAACTCATCTCTTGGTTCTCCCTTCACTGA 486 0.6255 MGLQSELNDVSSGSIPLLVLAQIAMCVNYLRSMLFALLQSLGLARFHTHQIVDDRFLAAVGSGLAGLIMLSDQLTLNNQLFFYEGPAHDHPCVVCQATFQDGDQLRMLPCRHVFHRRCFDGWLHHYKFNCPLCRSPLLSEERVALTERRLGQQLISWFSLH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03755 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 143 IPR013083 -
Viun7g03755 161 SMART ring_2 92 133 IPR001841 -
Viun7g03755 161 Pfam Ring finger domain 92 134 IPR001841 -
Viun7g03755 161 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Viun7g03755 161 PANTHER RING ZINC FINGER PROTEIN-RELATED 85 143 - -
Viun7g03755 161 SUPERFAMILY RING/U-box 88 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03755 Viun-Chr7 37987646 37988618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03755 1 161 C3H Transcription Factor Family AT1G15100 46.951 2.33e-45 144