Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03736 ATGTTAGAAGCCGAAGGCGACGATCAAGATCAAGGTCATGGAGACGGCGCCGTTCCAGGTGTAGCTTTGCAGAAACGCACATCCTTTCTCATGAATCTGTTATCGAGTCACGAGACTGGTGACTGGAGGAATCCTGGAAATACTTTGTATGTTACAGGCCTTCCCGGTTGGGCAACTGAGAGGAATCTTCGGGAGCTTTTCAGAACACAGGGAGAGGTTATTGACTGTCACTTGATAAGAAATTATTCGACCAATGAATCTTGTGGATATGCTTTTGTCACTATGGCAACTAAAGCTGATGCTGAGCGCTGTATCCAGTATTTCCATCACTCTGTTCATTTTGGTCGAGTGATAGTTGTGGAAGTGGTAATATTTAGCTACTGGTTTCAGAATGAGTCTAACCAAAAATTTCTACTTTCCGATAAACATTCCCTGATAAGTTTTGGCAGCAGGTCTTCTCTGTTGGTTTTACCCTGTCATTAG 483 0.4348 MLEAEGDDQDQGHGDGAVPGVALQKRTSFLMNLLSSHETGDWRNPGNTLYVTGLPGWATERNLRELFRTQGEVIDCHLIRNYSTNESCGYAFVTMATKADAERCIQYFHHSVHFGRVIVVEVVIFSYWFQNESNQKFLLSDKHSLISFGSRSSLLVLPCH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03736 160 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 121 IPR000504 GO:0003723
Viun7g03736 160 SMART rrm1_1 48 121 IPR000504 GO:0003723
Viun7g03736 160 CDD RRM_SF 49 121 - -
Viun7g03736 160 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 45 122 - -
Viun7g03736 160 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 49 118 IPR000504 GO:0003723
Viun7g03736 160 SUPERFAMILY RNA-binding domain, RBD 39 123 IPR035979 GO:0003676
Viun7g03736 160 Gene3D - 35 137 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03736 48 120 Eukaryotic Initiation Factors Gene Family AT1G49760 34.247 6.89e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03736 K12897 - vun:114191431 323.553