Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03646 ATGAGCCTTAATTCCCAGAATCTCCATTTCTTGTGGAGGCTCTCATCCTTTCTTCTTCTACTTCTTCAATCTGCTACATCTCAGTCTGTTACATCTCTTAACTCTGATGGGATTCTCTTGCTCAAATTCAAATACTCCATTCTCAGTGACCCTTTATCAGTCCTAGAGAGCTGGAACTACGATGATGCAACACCGTGTTCATGGTATGGTGTTACGTGCGACGAAATTGGAGCCCCCGGTACCCCTGATTTGTTCAGAGTAACAGGTTTGACACTTCCCAATAGCCAACTTTTGGGTTCCATTTCTGAAGACTTGGGCTTGATCCAATACCTTCGCCACATCGATCTCTCCAACAATTTCCTTAATGGCTCTCTACCCAACACTATCTTCAACTCTTCCCAGCTTCAAGTACTTTCCCTCTCAAACAATGTTATCTCCGGTCAACTACATCAGCTGGTTGGAAAACTAACAGACCTGAAAGTTCTCAATCTCTCTGACAATGCCTTTGCCGGGTTGGTCCCAGAAAACCTCACTACTCTACCAAACTTAACGGTTGTTTCTCTGAAGAGTAACTACTTTTCTGGTAGTGTCCCAACCGGGTTCAAATACGTGGAGATTCTGGATCTGTCCTCCAATTTGTTCAACGGTTCTTTGCCAGAAGACTTTGGCGGCGAAAGCTTACGCTACTTGAACCTCTCCTACAACAAGATTTCCGGAACAATTCCTCCAACATTCGCCAAACAGATTCCTGGAAACTCAACAGTGGACCTCTCGTTCAACAATCTGACAGGGGCAGTACCAGAGTCTTTGGCTTCGCTCAACCAGAAGACAGAGTTTCTATCAGGAAATGCTGATCTTTGTGGTAAGCCTCTGAAGATTCTGTGCACTGTTCCCTCTACTGAGTCCTCTGCTCCGCCCAATGTCACCACATCTTCACCAGCCATTGCTGCCATACCGAAAATTGACTCAAACCCTTCATCAAACACAACAGGAACCCCCACCAGTTCTCAGAATGTATCGCCAAGTGGCCTAAAACCTGCCACCATAGCAGCAATTGTGGTCGGAGACTTGGCTGGCATGGCCCTTTTGGCCCTCGTCATTCTCTTCGTCTACCAACAGAGAAAGAAAAGGTATTCGGATCCAAATCCAAACCCAAATTCTAAACGAGACACTAATGCTGCTTCTGGTAACAACTCAGAAAAGAAATACGAAACTGCTTCACGACAAGATGCAGATGCAAAAACAGTAACCCCTTCACTTCCCTGTTCCTGCTTAACAATCAAAGAAGAAGAAACCTCAGAGGCAACTAGCTCGGACAGCGACCGCGAGAGCAACACCGCAGTGGACATCATGGCAGCACAAAACGGGAACCTTCCGAAACAAGGCACCCTTGTAACAGTTGACGGGGAAACAAATTTGGAGCTTGAGACTCTGCTTAAGGCTTCAGCGTATATTCTGGGAAACAGCCGCGTCAGCATTGTCTACAAGGCAGTGCTAGAGGATGGGAGAGCCTTTGCCGTTAGAAGGATCGGTGAGTGTGGGATTGAGAGAAGGAAGGAGTTTGAGAACCAAGTGCGTGCCATTGCAAAGCTTCGCCATCCCAATTTGGTTAAGGTTCGCGGCTTCTGCTGGGGCCGAGATGATAAACTCCTAATATGTGACTACGTCCCCAATGGCAGCCTCGCCACCATTGATCACAGAAAATCAGGTTCGTCCCCTCTGAACTTGTCCTTGGAGATACGGTTGAAGATAGCAAAAGGGGTGGCACGAGCGTTGGTCTTCCTTCACGAGAAGAAGCACGTGCATGGCAATGTTAAACCCGGCAACATCCTGCTAAACTCAGAAATGGAAGCCATTATAAGCGATTTTGGGCTGGACAGGCTACTCCTGAACGATGTGACCCACAGAGGAAACGGTTCGGCCAGACAAGTGATGGCGAACCAAAGAAGCCAGCAAGAGGTGGCATTTGGTTCAAGTCCCTTCGGCGCAATGGGATCATCGTCGAGTGGTGCGGGCCACATAATGGTGTATCAAGCCCCGGAGTCACTTGAGAACATCAAACCCAGTCACAAATGGGACGTGTACTCTTTTGGAATGGTGCTGCTGGAGCTTCTAACTGGGAGGGTTTTCCTGGAGCGGGAATTGGAGCAGTGGAACGAACCGGGTTTGGTGGAGGAGGAGCAGAACCGGGTGGTGAGAATGGCTGACGCAGCAATAAAATCTGAAATAGAAGGGAGGGAGAATGTGGTATTGACATGGTTCAAGTTGGGGCTTAGCTGTGTTTCTCATACCCCACAAAGGAGACCCTCCATGAAAGAGGCTCTACAAATCTTGGACAAGATCCATGCTTCTGCTCCACTCAATTAA 2367 0.4795 MSLNSQNLHFLWRLSSFLLLLLQSATSQSVTSLNSDGILLLKFKYSILSDPLSVLESWNYDDATPCSWYGVTCDEIGAPGTPDLFRVTGLTLPNSQLLGSISEDLGLIQYLRHIDLSNNFLNGSLPNTIFNSSQLQVLSLSNNVISGQLHQLVGKLTDLKVLNLSDNAFAGLVPENLTTLPNLTVVSLKSNYFSGSVPTGFKYVEILDLSSNLFNGSLPEDFGGESLRYLNLSYNKISGTIPPTFAKQIPGNSTVDLSFNNLTGAVPESLASLNQKTEFLSGNADLCGKPLKILCTVPSTESSAPPNVTTSSPAIAAIPKIDSNPSSNTTGTPTSSQNVSPSGLKPATIAAIVVGDLAGMALLALVILFVYQQRKKRYSDPNPNPNSKRDTNAASGNNSEKKYETASRQDADAKTVTPSLPCSCLTIKEEETSEATSSDSDRESNTAVDIMAAQNGNLPKQGTLVTVDGETNLELETLLKASAYILGNSRVSIVYKAVLEDGRAFAVRRIGECGIERRKEFENQVRAIAKLRHPNLVKVRGFCWGRDDKLLICDYVPNGSLATIDHRKSGSSPLNLSLEIRLKIAKGVARALVFLHEKKHVHGNVKPGNILLNSEMEAIISDFGLDRLLLNDVTHRGNGSARQVMANQRSQQEVAFGSSPFGAMGSSSSGAGHIMVYQAPESLENIKPSHKWDVYSFGMVLLELLTGRVFLERELEQWNEPGLVEEEQNRVVRMADAAIKSEIEGRENVVLTWFKLGLSCVSHTPQRRPSMKEALQILDKIHASAPLN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03646 788 Gene3D Ribonuclease Inhibitor 203 297 IPR032675 -
Viun7g03646 788 MobiDBLite consensus disorder prediction 377 402 - -
Viun7g03646 788 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Viun7g03646 788 CDD STKc_IRAK 486 781 - -
Viun7g03646 788 Gene3D Transferase(Phosphotransferase) domain 1 556 786 - -
Viun7g03646 788 Gene3D Phosphorylase Kinase; domain 1 454 555 - -
Viun7g03646 788 MobiDBLite consensus disorder prediction 377 416 - -
Viun7g03646 788 Pfam Leucine Rich Repeat 111 129 IPR001611 GO:0005515
Viun7g03646 788 Pfam Leucine Rich Repeat 226 246 IPR001611 GO:0005515
Viun7g03646 788 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 88 780 - -
Viun7g03646 788 ProSiteProfiles Protein kinase domain profile. 480 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03646 788 FunFam Leucine-rich repeat receptor-like protein kinase 33 199 - -
Viun7g03646 788 Pfam Protein kinase domain 485 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03646 788 SMART serkin_6 484 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03646 788 MobiDBLite consensus disorder prediction 299 343 - -
Viun7g03646 788 CDD TM_EGFR-like 348 377 - -
Viun7g03646 788 Gene3D Ribonuclease Inhibitor 33 202 IPR032675 -
Viun7g03646 788 FunFam Leucine-rich repeat receptor-like protein kinase 203 297 - -
Viun7g03646 788 SUPERFAMILY Protein kinase-like (PK-like) 485 778 IPR011009 -
Viun7g03646 788 SUPERFAMILY L domain-like 38 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03646 Viun-Chr7 37439705 37442881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03646 14 785 Receptor kinase-like Gene Family AT4G37250 48.271 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun7g03646 Pkinase 5.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03646 - - gmx:100820334 1247.26