Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03639 ATGGACCCCAAGGACGAATTTGAACTCACAGGGACCACTTTTTCTCAGTTACTATTCGGAGATGACCATGATGCAACAACACCTGCATTGTCTCTCCCTCACCACCACTGCTCTTACGATCAACACAACCTCTCCGCTTCGCCTCTTTTCTCCTTTCACAAGCCACCCAAGATGCTATGCTTCGGAACCCAACCCCACATTCCCGTCACCCCTCAGAAATCTGTCATCACTTCCAGTGACTCCTCTTCTGCTTCATCCTCCAACCACACCAACACCGCCTTCACTTCCCTACCCAAGTCCACTAAAAAGCGGAATGGGTTGGGACAAGAACCAGTGGCCAAGGTGGGTGTCGGAGGCCAGAGACAAACTAAAAAGACCAAAGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTCGGGGAAAGAATCGCAGCGTTACAACAGCTTGTTTCTCCCTTCGGCAAGACAGATACAGCATCGGTGCTTCACGAGGCCATGGGATATATAAGATTTCTTCATGACCAAGTTCAGGTCCTGTGCTCTCCTTACTTGCAAAGCCTGTCTTCCTCACACCACCAACAGCAGCACGGAGAAGAAGGAGAAAACAGCGAAGGGGAAGTGAAGAAGGACTTGAGGAGTAGGGGTCTGTGCCTGATCCCTGTGGGATGCACCGTACACGTGGCGAGTAGCAACGGTGCTGATTTCTGGTCACCTGGTGCAATAGGGAAGAGGGTTTCACCATCAGGGAAGTAG 765 0.515 MDPKDEFELTGTTFSQLLFGDDHDATTPALSLPHHHCSYDQHNLSASPLFSFHKPPKMLCFGTQPHIPVTPQKSVITSSDSSSASSSNHTNTAFTSLPKSTKKRNGLGQEPVAKVGVGGQRQTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLSSSHHQQQHGEEGENSEGEVKKDLRSRGLCLIPVGCTVHVASSNGADFWSPGAIGKRVSPSGK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03639 254 MobiDBLite consensus disorder prediction 71 103 - -
Viun7g03639 254 FunFam Transcription factor bHLH113 120 190 - -
Viun7g03639 254 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 188 IPR036638 GO:0046983
Viun7g03639 254 Gene3D - 120 206 IPR036638 GO:0046983
Viun7g03639 254 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 230 - -
Viun7g03639 254 CDD bHLH_AtbHLH_like 138 183 IPR045239 -
Viun7g03639 254 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 176 IPR011598 GO:0046983
Viun7g03639 254 MobiDBLite consensus disorder prediction 71 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03639 Viun-Chr7 37394897 37397593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03639 93 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 49.007 2.74e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03639 - - gmx:100809107 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03639 7 37394897 37397593 Viun7g03639 7 37394897 37397593 ECH