Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03638 ATGGACCCCAAGGACGAATTTGAACTCACAGGGACCACTTTTTCTCAGTTACTATTCGGAGATGACCATGATGCAACAACACCTGCATTGTCTCTCCCTCACCACCACTGCTCTTACGATCAACACAACCTCTCCGCTTCGCCTCTTTTCTCCTTTCACAAGCCACCCAAGATGCTATGCTTCGGAACCCAACCCCACATTCCCGTCACCCCTCAGAAATCTGTCATCACTTCCAGTGACTCCTCTTCTGCTTCATCCTCCAACCACACCAACACCGCCTTCACTTCCCTACCCAAGTCCACTAGTTTGCAGAAAAAGCGGAATGGGTTGGGACAAGAACCAGTGGCCAAGGTGGGTGTCGGAGGCCAGAGACAAACTAAAAAGACCAAAGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTCGGGGAAAGAATCGCAGCGTTACAACAGCTTGTTTCTCCCTTCGGCAAGACAGATACAGCATCGGTGCTTCACGAGGCCATGGGATATATAAGATTTCTTCATGACCAAGTTCAGGTCCTGTGCTCTCCTTACTTGCAAAGCCTGTCTTCCTCACACCACCAACAGCAGCACGGAGAAGAAGGAGAAAACAGCGAAGGGGAAGTGAAGAAGGACTTGAGGAGTAGGGGTCTGTGCCTGATCCCTGTGGGATGCACCGTACACGTGGCGAGTAGCAACGGTGCTGATTTCTGGTCACCTGGTGCAATAGGGAAGAGGGTTTCACCATCAGGGAAGTAG 774 0.5142 MDPKDEFELTGTTFSQLLFGDDHDATTPALSLPHHHCSYDQHNLSASPLFSFHKPPKMLCFGTQPHIPVTPQKSVITSSDSSSASSSNHTNTAFTSLPKSTSLQKKRNGLGQEPVAKVGVGGQRQTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLSSSHHQQQHGEEGENSEGEVKKDLRSRGLCLIPVGCTVHVASSNGADFWSPGAIGKRVSPSGK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03638 257 MobiDBLite consensus disorder prediction 71 108 - -
Viun7g03638 257 MobiDBLite consensus disorder prediction 71 144 - -
Viun7g03638 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 191 IPR036638 GO:0046983
Viun7g03638 257 CDD bHLH_AtbHLH_like 141 186 IPR045239 -
Viun7g03638 257 Gene3D - 123 209 IPR036638 GO:0046983
Viun7g03638 257 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 233 - -
Viun7g03638 257 FunFam Transcription factor bHLH113 123 193 - -
Viun7g03638 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03638 Viun-Chr7 37394892 37397593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03638 100 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 51.020 5.09e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03638 - - gmx:100809107 303.523