Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03615 ATGACGAGCGCTTCAGAGCTATTCCACACCAGAAGGCATCGATTGGGACGAAATGCTATCGATCTAGGGTTCGACACAGAACTCCAAGCCGCCGATTCTTTCCGCCGTCGCCACCACGTGCGCCGCCTCCGTCATCACCCGGAGCGTGCATCTGATAGAGTCGGTGGGCGGTATCGACGGTCTTTCATAAATGATAGCGTTGATTCTGAAGAAACCGTAAGAGGCAGTCTTGGAGGAAGTACCAGTGAGAGGCTACCCGTGGGCGTTGTTCTTGCACGGGCCAGACTCCTTCAGAGGTTGAGAGGGGAACCTCTGTCTAGAAACAGGCAACATGGTATAGATTCATTAGGTGAGGATCGGGAAAGTGAATCATCAAATGAAGTTGCAACTGGGGCCACTCTAGTTACTGACTTGACTTCACAGATGGGAAGGTCCCAGTTCTTGCAGGAACTAAACAAAAAACCACCTGGACTTACTCAGGAGGCCATGGACTGTTTGAATCAGGAAGTTTTTAGCAGCAGCGAGATAGGATTGGATTCCAAGGTAATGCAGGACTGTAGTATATGCTTGGAAACTTTCACAGATGGAGATGAGCTGATACGTCTGCCATGTGGCCATAAATTCCACTCTGTTTGCTTGGATCCATGGATTCGCTGCTGTGGAGACTGCCCATATTGTCGAAGACCTGTAGTTCTTAATACTCACTTATCATAA 714 0.4902 MTSASELFHTRRHRLGRNAIDLGFDTELQAADSFRRRHHVRRLRHHPERASDRVGGRYRRSFINDSVDSEETVRGSLGGSTSERLPVGVVLARARLLQRLRGEPLSRNRQHGIDSLGEDRESESSNEVATGATLVTDLTSQMGRSQFLQELNKKPPGLTQEAMDCLNQEVFSSSEIGLDSKVMQDCSICLETFTDGDELIRLPCGHKFHSVCLDPWIRCCGDCPYCRRPVVLNTHLS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03615 237 SUPERFAMILY RING/U-box 185 233 - -
Viun7g03615 237 MobiDBLite consensus disorder prediction 107 127 - -
Viun7g03615 237 Pfam Ring finger domain 185 227 IPR001841 -
Viun7g03615 237 SMART ring_2 186 226 IPR001841 -
Viun7g03615 237 MobiDBLite consensus disorder prediction 107 125 - -
Viun7g03615 237 CDD RING-H2_PA-TM-RING 185 227 - -
Viun7g03615 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 231 IPR013083 -
Viun7g03615 237 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
Viun7g03615 237 PANTHER SI:CH211-59O9.10 31 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03615 Viun-Chr7 37259583 37261905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03615 1 231 C3H Transcription Factor Family AT1G49850 41.860 1.82e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03615 - - gmx:100814695 375.941