Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03594 ATGAGCTGCAACGGTTGTCGTGTTCTCAGAAAGGGTTGCAGTGAGAACTGCATGCTACGACATTGCCTACAATGGATAGAGAACCCACAAGCCCAAGCTCACGCCACCCTCTTTGTGGCCAAGTTCTTTGGCCGTGCTGCTCTCATGTCTTTCCTTTCCGCCGTACCTGCCAACCAAAGATCCGCTTTGTTTCAGTCACTGCTTTATGAAGCAGTGGGACGTACTATAAATCCAGTGAATGGAGCAGTGGGGCTGTTGTGGACCGGAAACTGGCACATGTGCCAAATGGGTGTGGAGAAAGTGCTCCGGGGTGGTGCTGCGTTGACCCCACTCCCTCACTTCCTGGGTAGTGCAGATGTACAGTATCAACACCTTGTAACTCAGAGAGTGATGATTGCAGGTGGAACATTGTGTCACCAGGCAAAAAAGCAACGTGTGGGGACACCCTCCCAGGAATCTGAGACCTCCTATGTGGAACTTAAACCACCGGATTCTGCCCCTCAAAGTCAAAGGAATCTCCTTACACTATTCTTCTGA 537 0.5084 MSCNGCRVLRKGCSENCMLRHCLQWIENPQAQAHATLFVAKFFGRAALMSFLSAVPANQRSALFQSLLYEAVGRTINPVNGAVGLLWTGNWHMCQMGVEKVLRGGAALTPLPHFLGSADVQYQHLVTQRVMIAGGTLCHQAKKQRVGTPSQESETSYVELKPPDSAPQSQRNLLTLFF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03594 178 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Viun7g03594 178 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Viun7g03594 178 MobiDBLite consensus disorder prediction 143 168 - -
Viun7g03594 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03594 Viun-Chr7 37190561 37192329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03594 1 115 AS2 family AT3G49940 77.391 3.17e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun7g03594 LOB 9.2e-26 No_clan