Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03587 ATGGAATCTTCTCAGCAGATTTCTGAAGAATGGGGTTCTCTCTGTGGATTGCACACAACTGAAGAAGCTGACTTTATGGCTCAGTTGTTTGGTGGTACTAACTATTCTGTCACAGAAAAGCAATATGGAAATACCACTTTTGGTTTTTGGCCCGACCATGATTCCATGAAAGCCATTAATAGCAACTCATATTTCCTTCCAAATGTTACAGACATTAACTTATGTTTCTCACAAGGGAGTAGCTCCAGCATTGACAGTGGTAATAGTATCTTTTCCACTACAAGTAGTGATCAAGCAACAAACTTTGACTCTCTTTCCATGGCTTTTTGCCTGGGAGATGCCCAATTTTTTCCCCATAGTTTTCACTGTAATGACAACTCAAACAAACACATAAATGAAAACACTGATGAAGAGTCAAGTCTAGACCCAGTAGCTCTTGCTGACAACAATTTGCAGTATGAAATTATGGTTTCTGAATATGAACAGGAGGATAGAAGTGAAAACCTGGAGAACCTAACAAAAAGGCTTAGGAACTCAAAAGAGGTCTCAAAAACATTGAGGAATACCAAGTTGAAGAAAAATTCAAAATCTGCTTCAACGAACAAGAATGAAGATGACCGAAGCTTGAACCTCCAAGGGCTTGGCTGTTTTTCACAGGGTGACTCTAATGCTTCTCTGAAGCCAAATGGAGGAGCATTGAAAGATCCTGCACCTCCCAATTTGCTTAGAAAATCAAGACCAACTAAGGGTCCTGCTACTGATCCACAGAGCCTTTATGCAAGAAAGAGAAGAGAAAGAATAAATGAAAGGTTGAGAATACTGCAGAGTCTTGTCCCCAACGGAACTAAGGTGGATATCAGCACCATGCTTGATGAAGCAGTGCAATACGTTAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGCTCTGACGAATTGTGGATGTATGCCCCAATTGCTTACAATGGTATAAACATTGGACTTGACCTCACTATTTCTCCAACCAAAGGAAGATGA 1014 0.4004 MESSQQISEEWGSLCGLHTTEEADFMAQLFGGTNYSVTEKQYGNTTFGFWPDHDSMKAINSNSYFLPNVTDINLCFSQGSSSSIDSGNSIFSTTSSDQATNFDSLSMAFCLGDAQFFPHSFHCNDNSNKHINENTDEESSLDPVALADNNLQYEIMVSEYEQEDRSENLENLTKRLRNSKEVSKTLRNTKLKKNSKSASTNKNEDDRSLNLQGLGCFSQGDSNASLKPNGGALKDPAPPNLLRKSRPTKGPATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLDEAVQYVKFLQLQIKLLSSDELWMYAPIAYNGINIGLDLTISPTKGR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03587 337 FunFam Basic helix-loop-helix transcription factor 252 309 - -
Viun7g03587 337 SMART finulus 257 306 IPR011598 GO:0046983
Viun7g03587 337 Gene3D - 255 309 IPR036638 GO:0046983
Viun7g03587 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 251 300 IPR011598 GO:0046983
Viun7g03587 337 MobiDBLite consensus disorder prediction 172 188 - -
Viun7g03587 337 Pfam Helix-loop-helix DNA-binding domain 261 301 IPR011598 GO:0046983
Viun7g03587 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 252 317 IPR036638 GO:0046983
Viun7g03587 337 MobiDBLite consensus disorder prediction 172 262 - -
Viun7g03587 337 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 92 323 - -
Viun7g03587 337 MobiDBLite consensus disorder prediction 204 226 - -
Viun7g03587 337 Coils Coil 169 189 - -
Viun7g03587 337 CDD bHLH_AtIND_like 252 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03587 Viun-Chr7 37137197 37138855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03587 10 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 39.266 8.14e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Viun7g03587 HLH 2.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03587 - - gmx:100816788 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02945 2 33653172 33656183 Viun7g03587 7 37137197 37138855 PCT