Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03586 ATGGATCCTACTGAGCAAATTTCTGAAGAATGGAGTTCTCTCAGTGGTTTTTGCACAGCTGAGGAAGCTGACTTCATGAGCCAGTTGCTTGGCAACTGCTCACTCCCTGAAAATCTGTGTGGAAATTTCCACTTGGGAATTCCATCTGCGGCATGGCCAGGCCATGAATCAACGATAGTGACGGTGACAAGCATCAATGACAGTCCATATTTTCCTGCAACCGCTGATTATAGTAATAGTAATTATTTATGTTTTTCACAAGGTAGTTGTTCCACTTCTGATAGTAGCAATATATTTCCTGCTACAAGTGGCAATAAACACTGCTTGAATGATCCAGTGGCCAACATTGGCTACATGTCCATGGGTTTGGCCAAGTTCAGCCCATATAATGTTCAAGGGAGTGACACCCATCAGATGAATGAAAACACTGATCAAGATTTAGGTCCTGAGGTTATTGCTGACAAGAATTCGCAGGATCACCAGGAATGTGAAGTACTAGTTTCTGAACCAGCAACAGAGGATATAACCACCAATCTAGAGAAGTCGGGAAAAAGATCTAGGGGCTCAATGCAGGTACGAAAGAGCAAGAAAAATGCTAAATCCGTGAAGAAACCAAAATCTGATTCTATAAGTAACTCTGAAGAGGGTAGAAGTCCTGATCTTCAGGGTTGCTGCTCAGAGGATGATGATTCCAATGCTTCTCAGGAGCTAAATGGAGGAGGATCTTCAAATCTGAGTCTGGAGGATTCTACATCGCTTAAGTTGAAGGGAAAAAAATCAACAGCTAGTAGAGGTTCTGCTACTGATCCACAAAGTGTATATGCAAGGAGAAGAAGAGAAAGAATAAATGAAAGACTGAAAATCCTACAAAACCTTGTCCCGAACGGAACCAAGGTGGATATCAGCACCATGCTTGAGGAAGCCGTTCAATATGTGAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGTTCTGATGATCTTTGGATGTACGCTCCTATTGCTTACAATGGAATGAACATTGGACTAGACCTCAATATTACCCCAACCAAACAGCCATAA 1059 0.4193 MDPTEQISEEWSSLSGFCTAEEADFMSQLLGNCSLPENLCGNFHLGIPSAAWPGHESTIVTVTSINDSPYFPATADYSNSNYLCFSQGSCSTSDSSNIFPATSGNKHCLNDPVANIGYMSMGLAKFSPYNVQGSDTHQMNENTDQDLGPEVIADKNSQDHQECEVLVSEPATEDITTNLEKSGKRSRGSMQVRKSKKNAKSVKKPKSDSISNSEEGRSPDLQGCCSEDDDSNASQELNGGGSSNLSLEDSTSLKLKGKKSTASRGSATDPQSVYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDLNITPTKQP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03586 352 Gene3D - 266 323 IPR036638 GO:0046983
Viun7g03586 352 MobiDBLite consensus disorder prediction 166 276 - -
Viun7g03586 352 CDD bHLH_AtIND_like 267 329 - -
Viun7g03586 352 FunFam Basic helix-loop-helix transcription factor 267 324 - -
Viun7g03586 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 315 IPR011598 GO:0046983
Viun7g03586 352 SMART finulus 272 321 IPR011598 GO:0046983
Viun7g03586 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 266 331 IPR036638 GO:0046983
Viun7g03586 352 MobiDBLite consensus disorder prediction 171 185 - -
Viun7g03586 352 MobiDBLite consensus disorder prediction 214 270 - -
Viun7g03586 352 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 124 324 IPR045843 GO:0003700|GO:0006355
Viun7g03586 352 Pfam Helix-loop-helix DNA-binding domain 276 316 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03586 Viun-Chr7 37131718 37133595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03586 10 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 37.940 7.78e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Viun7g03586 HLH 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03586 - - gmx:100817334 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03586 7 37131718 37133595 Viun7g03586 7 37131718 37133595 ECH