Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03561 ATGTCTCACTCACCGGACTCTCCCTCCGCCGCCGCTAACTTCCTCTGCCGCGAGCACGCCAGCGAGGTCACCTCCGATCACCACCCCCCGCCAACCCCTCCCTTCCCAGATGCAGATGACGCGCCCATCTGCGGCCTCCTCGACGCCGAAGTCAACCACATGCCGGAGAAGGACTACCTCCGCCGCTGTCGTGACCGCTCCATCGACTTCACCGCACGCCTCGACGCTGTCAACTGGATCTTAAAGGTCCACGCATTCTACCAGTTTTCTCCAGTGACGGCGTTTCTCTCCGTCAACTATTTGGACCGTTTCCTCTCTCTATGTTCTATTCCCCAATCGAGTGGGTGGCCGTTTCAGCTGCTATCAGTGGCATGCCTGTCTCTGGCAGCGAAAATGGAAGAGTCTCATGTCCCGTTCTTACTGGACCTGCAACTGTTTGAACCCAAATTCGTGTTTGCTCCCAAAACCATCCAGAGAATGGAGCTTTGGGTCATGTCCAATCTCAAATGGAGACTTCGCTCCGTCACACCCTACGATTATCTCAGCTATTTCATCACCAAGCTCCCTTCCTCCTCTTCTTCCGACTCCACCACTCACTGTTTCTCCCACGCCTCCAATCTCATCCTTAGCACCACCCGTGTGATTAACTTCTTGGAATTTGCGCCCTCCACAGTAGCAGCCGCCGCCGTGCTGTGCTCGGCTGGACGTGACATTGCTTCCGCCAACGGCCAATGGCCGCTGATTTTTCATGATAGAGTAAACCATGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTTACGCATCTAGTTCCACCATCAAAGAGAGAGTAGCCGAGCCGCCGCCGTCCAGTCCCGTCGGCGTGCTTGACGCTGCCACCTGTGGCAGCTGTGACACACCTTCCGAGAGGATTTTCTTCGGTTCAACAGATGAACAACAAGCCGAGCCGCCAAATAAACGGCTTCGCTCCTCTGCTCCAGATGCACAGTAG 1011 0.5539 MSHSPDSPSAAANFLCREHASEVTSDHHPPPTPPFPDADDAPICGLLDAEVNHMPEKDYLRRCRDRSIDFTARLDAVNWILKVHAFYQFSPVTAFLSVNYLDRFLSLCSIPQSSGWPFQLLSVACLSLAAKMEESHVPFLLDLQLFEPKFVFAPKTIQRMELWVMSNLKWRLRSVTPYDYLSYFITKLPSSSSSDSTTHCFSHASNLILSTTRVINFLEFAPSTVAAAAVLCSAGRDIASANGQWPLIFHDRVNHEMVRCCHQLMEEYVVDTCYASSSTIKERVAEPPPSSPVGVLDAATCGSCDTPSERIFFGSTDEQQAEPPNKRLRSSAPDAQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03561 336 SMART Cyclin_C_2 175 293 IPR004367 -
Viun7g03561 336 FunFam D6-type cyclin 170 263 - -
Viun7g03561 336 Gene3D - 46 261 - -
Viun7g03561 336 CDD CYCLIN_AtCycD-like_rpt2 175 265 - -
Viun7g03561 336 MobiDBLite consensus disorder prediction 312 336 - -
Viun7g03561 336 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Viun7g03561 336 Pfam Cyclin, N-terminal domain 47 172 IPR006671 -
Viun7g03561 336 Pfam Cyclin, C-terminal domain 175 276 IPR004367 -
Viun7g03561 336 SUPERFAMILY Cyclin-like 177 271 IPR036915 -
Viun7g03561 336 Gene3D - 56 173 - -
Viun7g03561 336 PANTHER CYCLINS 46 274 IPR039361 -
Viun7g03561 336 SMART cyclin_7 78 166 IPR013763 -
Viun7g03561 336 FunFam D2/4-type cyclin 56 169 - -
Viun7g03561 336 SUPERFAMILY Cyclin-like 43 172 IPR036915 -
Viun7g03561 336 CDD CYCLIN_AtCycD-like_rpt1 72 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03561 Viun-Chr7 36994741 36997007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03561 3 272 Core Cell Cycle Gene Families AT1G70210 42.806 3.67e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03561 K18810 - gmx:100776178 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03561 7 36994741 36997007 Viun7g03561 7 36994741 36997007 ECH