Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03534 ATGGCTCAGCTTTCGCCAAGGCTACTTTCCTTTCTCTATTGTCTTTTGATAACAAATTTTATATCTCAAGTTAGTGCAGCTAACAATACACAAAACTTCCACTACTTCTGTGATCATGATAACGATAGAGGAGACTACACAGCCAACAGCACCTACCACACCAACCTCAACACCCTTTTGTCCACTCTCATTTCCAATACAGAAATCGATTACGGTTTCTACAATTTCACAAAAGGCGAAAACACCGATAAAGTTTACGCCATTGGGCTGTGTAGAGGAGACGTTGAACCAGAGAACTGCCGCACATGCCTGAACGGTTCCAGAGCCAATCTCACTGAACTTTGTCCAAACCGAAAGGAAGCAATTGGTTGGTACGAGGATGAGAAGTGTATGTTGCGCTACTCAGACCGCTATATATTCGGCCTTAATGAAACTGGAAAACCTACGTATTATGCTCATAACGAGGACAGCCCAACGGACTTGCATCAGTTCAATGAAGATGTCAACACCTTGCTGTATAACCTATCCCGCAGAGCTGCATCAGGTGACTCTCGTGTTAAGTATGCTGCAGATAATATATCATCAGGTTCTAACGGTCCCATATATGGTCTAGTTCAGTGCACACCGGACTTGGAAGAGTCAGAGTGCGCTGATTGCTTGTCTCGGTCCATTGAACGTATCCCAATGGATTGTTGTAAAGACAGCAAAGGTGGTAGGGTTGTTAGACCCAGTTGTCATATGAGGTTCGAAACTTCCTATAAGTTCTATGGAGATCCAGCATTTGTACCATCACCTCCACCTCCACCTCCAGGAAAGACCATAACCATCATCGTCATAGCTATAGCAGTGACAGTTGTTGTAATTGTTTCCGTTTTTGTCTACATTCGATTTAAGCGGAGGAAGTCATGGAAAAAGTTTGAAAGTGCTACAAATGACTTTTCTGATTCTAATAAACTAGGACAGGGTGGATTTGGAGCTGTTTACAGGGGTACGCTACCCAACGGACAAGAGATTGCCGTCAAAAGGTTGTCAGCTAATTCTAGACAAGGAGATGCAGAATTCAAGAATGAGGTGCTTTTATTGGCCAAACTTCAGCACCGAAATTTAGTTAGACTACTTGGTTTCTGTATCGAAGGAAGAGAAAAGCTACTTGTTTACGAATTTGTTCCAAATAAAAGCCTTGATTACTTCATATTTGATGAAACAAAGAGAGCGAAATTAGATTGGGATACACGCTTCAAAATCATTGCGGGTACTGCTCGAGGTATTCTCTACCTCCATCAAGATTCTCGATTGCGCATTATCCATCGTGATCTCAAAGCAGGTAACATTCTCTTAGACGAAGAGATGAACCCTAAGATAGCAGATTTTGGCTTGGCAAGATTATTTGTTGTGGACCAAACTCATGAAGATACACAGAGAGTTGTTGGGACGTATGGATATATGGCACCTGAGTATTTGATTGGACAGTTTTCGCAGAAGTCAGATGTTTTTAGCTTTGGTGTATTGATTCTTGAGATTGTAAGTGGCCAGAAAATCAGTAGCATTCAACATGGAGAGGAAACAGGATATCTATGCCATATTGCATGGCGACGTTGGAGCGAAGGAAGAGCAAGAGATATTGTAGATGCTACATTAAACAATGGTTCAGAAAGTGAAATAATGAGATGCATCCATATTGGGTTGCTGTGTGTTCAAGACAATGCAGCAGCCAGACCCACCATGGCTTCCGTTGTAGCCATGCTGACTAGCCATTCTTTCGGTCTACCTCTGCAAGTACCAACGGCACCTGCATTTTATGGGAATGCTAAGTCTGGAATCTTTGCAGACATGCAGTTATGGGAGATTAATTCAGGGACAACAAGATCAAACGAAACCACCAATAGATCAGATCAAGATTCGCTCAATGAGGCTTCAATTACTGAGCCATATCCTCACTAG 1941 0.424 MAQLSPRLLSFLYCLLITNFISQVSAANNTQNFHYFCDHDNDRGDYTANSTYHTNLNTLLSTLISNTEIDYGFYNFTKGENTDKVYAIGLCRGDVEPENCRTCLNGSRANLTELCPNRKEAIGWYEDEKCMLRYSDRYIFGLNETGKPTYYAHNEDSPTDLHQFNEDVNTLLYNLSRRAASGDSRVKYAADNISSGSNGPIYGLVQCTPDLEESECADCLSRSIERIPMDCCKDSKGGRVVRPSCHMRFETSYKFYGDPAFVPSPPPPPPGKTITIIVIAIAVTVVVIVSVFVYIRFKRRKSWKKFESATNDFSDSNKLGQGGFGAVYRGTLPNGQEIAVKRLSANSRQGDAEFKNEVLLLAKLQHRNLVRLLGFCIEGREKLLVYEFVPNKSLDYFIFDETKRAKLDWDTRFKIIAGTARGILYLHQDSRLRIIHRDLKAGNILLDEEMNPKIADFGLARLFVVDQTHEDTQRVVGTYGYMAPEYLIGQFSQKSDVFSFGVLILEIVSGQKISSIQHGEETGYLCHIAWRRWSEGRARDIVDATLNNGSESEIMRCIHIGLLCVQDNAAARPTMASVVAMLTSHSFGLPLQVPTAPAFYGNAKSGIFADMQLWEINSGTTRSNETTNRSDQDSLNEASITEPYPH 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03534 646 ProSitePatterns Protein kinases ATP-binding region signature. 319 341 IPR017441 GO:0005524
Viun7g03534 646 Gene3D - 147 255 IPR038408 -
Viun7g03534 646 Gene3D - 31 138 IPR038408 -
Viun7g03534 646 ProSiteProfiles Gnk2-homologous domain profile. 146 254 IPR002902 -
Viun7g03534 646 SUPERFAMILY Protein kinase-like (PK-like) 293 582 IPR011009 -
Viun7g03534 646 Gene3D Phosphorylase Kinase; domain 1 287 388 - -
Viun7g03534 646 SMART serkin_6 313 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03534 646 Pfam Protein kinase domain 314 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03534 646 FunFam Cysteine-rich receptor-like protein kinase 10 297 388 - -
Viun7g03534 646 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 642 - -
Viun7g03534 646 MobiDBLite consensus disorder prediction 619 646 - -
Viun7g03534 646 ProSiteProfiles Protein kinase domain profile. 313 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03534 646 Pfam Salt stress response/antifungal 37 136 IPR002902 -
Viun7g03534 646 Pfam Salt stress response/antifungal 159 251 IPR002902 -
Viun7g03534 646 MobiDBLite consensus disorder prediction 619 639 - -
Viun7g03534 646 Gene3D Transferase(Phosphotransferase) domain 1 389 587 - -
Viun7g03534 646 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Viun7g03534 646 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 139 - -
Viun7g03534 646 FunFam Cysteine-rich receptor-like protein kinase 28 389 590 - -
Viun7g03534 646 FunFam Cysteine-rich receptor-like protein kinase 10 148 255 - -
Viun7g03534 646 CDD STKc_IRAK 319 583 - -
Viun7g03534 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03534 Viun-Chr7 36820500 36824477 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03534 7 599 Receptor kinase-like Gene Family AT4G21410 46.544 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03534 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03534 - - vun:114191428 1251.5