Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03533 ATGGCTCAGCTTTGGCGAAGGCTACTTTACTTTCTCTTATGTCTTCTGATAACAAATTTCGTATCTCAAGTTAGAGCAGCTAACACTACACAAAACTTCCACTACTTCTGTGATGATAATACCACCGGTAATGGAACCTACACAGCCAACAGCGCCTACCACGCCAACCTCAACACCCTTTTGTCCACTCTCATTTCCAATACAGAAATCGATTACGGTTTCTACAATTTCACAAACGGCGAAAACACCGATAAAGTGTACGCCATTGGGCTGTGTAGAGGAGACGTTGAGCCAGAGAACTGCCGCACATGCCTGAACGGTTCCAGAGCAAATCTCACTGAACGTTGTCCAAACCGAAAGGAAGCAATTGGTTGGTACGAGGATGAGAAGTGCATGCTGCGCTACTCAGACCGCAATATATTCGGCCTTATGGAAATTGGACCTGCTTTTTATGCTAACAACGACAGAAATGCATCGGATTTGGATGAGTTCAATGAAGATGTCAACACCTTGCTGCGTAACCTGATGCCCATAGCTGCATCAGGTGACTCTCGTGTTAAGTATGCTGCAGATGGTATATCATCAGGTTCTAAGGTCATATATGGTCTTGTTCAGTGCACACCGGATTTGGAAGAGTCAGAGTGCGCTGATTGCTTGTCTCAGTCCATTGAACGTATCCCAATAGATTGTTGTAAAGACAAGATAGGTGGTAGGGTTGTTAGACCCAGTTGTTGTATGAGGTTCGAAACTTCCTTTAAGTTCTATGGAGATCCAGCATTTGTACCACCAGCTCCTCCTCCTTCCACCACCACCACCACGGGAAAGAGCAACGCAACTATCATCATCGCCATAACAGTGCCCGTTGTTGTAATTGTTTTCGCGGTGCTTATTTTTATCTACATTCGTTTAACAGCGAGGAAGCCACGGAAAAAGTTTGAAACTCAAAAAGAAGAACCAGATGATGATGATGGTGATGATGGAATTGACGCTTCTGAGCCATTGCAAATCAGATTTAGCATCATACGAGATGCTACAAATGACTTTTCTGATTCTAATAAACTTGGACAGGGTGGATTTGGAGCTGTTTACAGGGGTACGCTACCCAATGGACAAGAGATTGCCGTCAAAAGGTTGTCAGCTAATTCTAGACAGGGAGATGCAGAGTTCAAGAATGAGGTGCTTTTAGTGGCCAAACTTCAGCACCGAAATTTAGTTAGACTACTTGGTTTCTCTATGGAAGGAAGAGAAAAGCTACTTGTCTACGAATTTGTTCCAAATAAAAGCCTTGATTATTTCATATTTGATGAAACCAAGAGAGCACAATTAGATTGGGATACGCGCTTCAAAATCATTGCGGGTACTGCTCGAGGTATTCTCTACCTCCATCAAGATTCTCGATTGCGCATTATCCATCGTGATCTCAAAGCAGGTAACATTCTCTTAGACGAAGAGATGAACCCTAAGATAGCAGATTTTGGCTTGGCAAGGTTATTTGTTGTGGACCAAACTCATGAAGATACACAGAGAGTTGTTGGGACATATGGATATATGGCACCTGAGTATGCATTGCATGGACAGTTTTCAGAGAAGTCAGATGTTTTTAGTTTTGGTATATTGATTCTTGAGATTGTAAGTGGGCAGAAGATTAGTAGCATTCAACATGGAGAGGAAACGGGCGATCTACGCCATATTGCATGGCGAAGTTGGAGGGAAGGAAGAAGAAGAGATATTGTAGATCCGACATTAAACAATGGTTCGGAAAGTGAAATAATGAGATGCATCCATATTGGGTTACTGTGTGTTCAAGACAATGCAGCTGCGAGACCCACCATGGCTTCCGTTGTACCCATGCTGAATAGCCATTCTTTCAGTCTGCAAGTACCTATGGCACCTGCACTTTATGGGAATGCCATGTCTGGAATCATTGCAGACATGCAGTTATGGGAGATTAATTCAGGGACAACAAGATCAAGAGAATCCACCAATAGATCAGATCAAGATTCGCTCAATGAGGCTTCAATTACTGAGCCATATCCTCGATAG 2043 0.4312 MAQLWRRLLYFLLCLLITNFVSQVRAANTTQNFHYFCDDNTTGNGTYTANSAYHANLNTLLSTLISNTEIDYGFYNFTNGENTDKVYAIGLCRGDVEPENCRTCLNGSRANLTERCPNRKEAIGWYEDEKCMLRYSDRNIFGLMEIGPAFYANNDRNASDLDEFNEDVNTLLRNLMPIAASGDSRVKYAADGISSGSKVIYGLVQCTPDLEESECADCLSQSIERIPIDCCKDKIGGRVVRPSCCMRFETSFKFYGDPAFVPPAPPPSTTTTTGKSNATIIIAITVPVVVIVFAVLIFIYIRLTARKPRKKFETQKEEPDDDDGDDGIDASEPLQIRFSIIRDATNDFSDSNKLGQGGFGAVYRGTLPNGQEIAVKRLSANSRQGDAEFKNEVLLVAKLQHRNLVRLLGFSMEGREKLLVYEFVPNKSLDYFIFDETKRAQLDWDTRFKIIAGTARGILYLHQDSRLRIIHRDLKAGNILLDEEMNPKIADFGLARLFVVDQTHEDTQRVVGTYGYMAPEYALHGQFSEKSDVFSFGILILEIVSGQKISSIQHGEETGDLRHIAWRSWREGRRRDIVDPTLNNGSESEIMRCIHIGLLCVQDNAAARPTMASVVPMLNSHSFSLQVPMAPALYGNAMSGIIADMQLWEINSGTTRSRESTNRSDQDSLNEASITEPYPR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03533 680 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Viun7g03533 680 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Viun7g03533 680 Pfam Protein kinase domain 349 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03533 680 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Viun7g03533 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Viun7g03533 680 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 678 - -
Viun7g03533 680 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Viun7g03533 680 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03533 680 FunFam Cysteine-rich receptor-like protein kinase 10 148 252 - -
Viun7g03533 680 Gene3D Transferase(Phosphotransferase) domain 1 424 627 - -
Viun7g03533 680 CDD STKc_IRAK 354 619 - -
Viun7g03533 680 SMART serkin_6 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03533 680 FunFam Cysteine-rich receptor-like protein kinase 10 307 423 - -
Viun7g03533 680 FunFam Cysteine-rich receptor-like protein kinase 28 424 626 - -
Viun7g03533 680 SUPERFAMILY Protein kinase-like (PK-like) 332 618 IPR011009 -
Viun7g03533 680 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 140 - -
Viun7g03533 680 MobiDBLite consensus disorder prediction 654 680 - -
Viun7g03533 680 Gene3D - 149 252 IPR038408 -
Viun7g03533 680 Gene3D - 34 139 IPR038408 -
Viun7g03533 680 Pfam Salt stress response/antifungal 37 137 IPR002902 -
Viun7g03533 680 Pfam Salt stress response/antifungal 156 250 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03533 Viun-Chr7 36807210 36811204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03533 7 680 Receptor kinase-like Gene Family AT4G21410 46.418 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03533 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03533 - - var:108324787 1167.53