Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03531 ATGACTGCAATTTTCTTTCTCTTCTGTGTTTGTGTCATCGTAATCATATCGGGGGCCAGCGCTCAGACATCATGTGATAACAACAACGGCAACTACACAGTCAACAGCACTTACTACAACAACCTCAACATCCTCCTATCCAGTTTCTCTACCCACGCCGAAATCAACTACGGTTTCTACAACTTCTCTCATGGCCAAGGCACGGACAAAGCACACGCCGTTGGGGTCTGCAGAGGGGACCGTACACAGGAAGAATGCCTCAAATGTCTCAACGATTCCAGAGTGACTCTCACAAAGGAATGTCCAAACCAGAAAGAGGCAATTGTGTGGGATGGGGAATGCTCCTTGCGCTACTCTAACCGCTCCATAATTGGCCTCATGGAGAATCAACCTACGGTGCTGCTCTATTTAACGTTGGAAGTAAGGGGTTCGGTTGAGCAATTCAACGCAACGCTTAAAAGCTTGATGAGGAATCTAACACGCACAGCTGCGTCCGGTGACTCTCGTCGTAAGTATGCTACAGGAAGTGCATCTGCTCCTGATTTTCAAACAATATACGGTTACACGCAGTGCACGCCTGATTTGTCTTCCGAAGATTGCACCAAGTGTTTGGATGAAGCTGTCTCACAAATCCCAGATTGCTGTAGGGGCAGGGCTGGAGGCAATGTTTTGAAGCCCAGTTGTAGAATTAGATTTGACCCTTATCTCTTCTATGGACCCACACTCAAGCTAGACACAGATGCACCACCACCAACAACCACCCCACCACCCTCTCGCTTCACCAACAACACTTCTTTACATTCGCAAGGAAAGAGCAACACGTCACGAACCATCATGGCTATAGCAGTGCCAGTTGCTAGTGTTGTTTTAGCGTTCAGTCTTTTATGTATATATCTTATAGTGAGGAAGCCAGGAAAAGAAATTGAAATTGGAAAAAAAGAGGACAGTGACGATGAAGATGAAGTTACACTTGCTGAGTCATTGCAATTCAAATTTGAAACCATCCGAGTTGCCACAAATGAATTTGTTGATTCTAATAAGCTTGGACAGGGCGGGTTTGGAGCTGTCTACAAAGGTCAGCTTTCCGATGGACAATCAATTGCTGTCAAAAGGTTGTCAAGTGCTTCTGGGCAAGGAGATACAGAGTTCAAGAATGAAGTGCTTTTATTGGCTAAGCTTCAACACCGAAATTTAGTTAGACTAATTGGTTTCTGCTTGGAAGGAAGAGAAAGGCTGCTTATCTATGAATTTGTTCCTAACAAAAGTCTTGATTACTTCATATTTGATCCAATAAAGAAAACACAGTTGGATTGGCAAATGCGCTACCAAATTATTAGAGGTATTACAAGAGGCATTCTCTATCTCCATGAGGATTCTCAACTACGAATTATACACCGAGATCTCAAAGCAAGCAACATTCTCCTGGACGAAAACATGTGTCCTAAGATATCAGATTTTGGGATGGCAAGACTTTTTCACGTTGATCAGACTCAAGCAAATACACATAGAGTTGTTGGAACCTATGGATATATGGCTCCTGAGTATGCAATATACGGTCAGTTTTCAACAAAATCAGATGTTTTTAGTTACGGTGTGCTGGTTCTTGAGATTGTAAGTGGCCGAAAAAGCATTGGTGCTCGTCATGGGGAGACAGTGGAGGATCTATTGAGCTTTACATGGCGAAACTGGAAGAATGGAACAATTACAAATATTGTAGACCCCACATTAATCAACGGTTCGCGAAATGAAATGATGAGATGCATACACATTGGGTTACTATGTGTTCAAGAAGATATGGCTGCCAGACCAACCATGGCTTCTGTTGTTCTCATGCTTAATAGCTATTCTATCACTCTCCCAGTACCTTCTGAACCTGCATTTGTTGTGAGTAGTAGCACAAGAAGCTTTCCGAACATGTTGGCATGGGAGCATAATTCAAGGGAAACAGGATCGACTGAATCCACAAATAAATCAGCTCAATATTCAGTAAATGAGGCTTCAATTACTGAGCTATACCCTCGCTAG 2025 0.4316 MTAIFFLFCVCVIVIISGASAQTSCDNNNGNYTVNSTYYNNLNILLSSFSTHAEINYGFYNFSHGQGTDKAHAVGVCRGDRTQEECLKCLNDSRVTLTKECPNQKEAIVWDGECSLRYSNRSIIGLMENQPTVLLYLTLEVRGSVEQFNATLKSLMRNLTRTAASGDSRRKYATGSASAPDFQTIYGYTQCTPDLSSEDCTKCLDEAVSQIPDCCRGRAGGNVLKPSCRIRFDPYLFYGPTLKLDTDAPPPTTTPPPSRFTNNTSLHSQGKSNTSRTIMAIAVPVASVVLAFSLLCIYLIVRKPGKEIEIGKKEDSDDEDEVTLAESLQFKFETIRVATNEFVDSNKLGQGGFGAVYKGQLSDGQSIAVKRLSSASGQGDTEFKNEVLLLAKLQHRNLVRLIGFCLEGRERLLIYEFVPNKSLDYFIFDPIKKTQLDWQMRYQIIRGITRGILYLHEDSQLRIIHRDLKASNILLDENMCPKISDFGMARLFHVDQTQANTHRVVGTYGYMAPEYAIYGQFSTKSDVFSYGVLVLEIVSGRKSIGARHGETVEDLLSFTWRNWKNGTITNIVDPTLINGSRNEMMRCIHIGLLCVQEDMAARPTMASVVLMLNSYSITLPVPSEPAFVVSSSTRSFPNMLAWEHNSRETGSTESTNKSAQYSVNEASITELYPR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03531 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Viun7g03531 674 Gene3D Phosphorylase Kinase; domain 1 305 417 - -
Viun7g03531 674 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 19 123 - -
Viun7g03531 674 FunFam Cysteine-rich receptor-like protein kinase 10 133 237 - -
Viun7g03531 674 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Viun7g03531 674 Gene3D Transferase(Phosphotransferase) domain 1 418 619 - -
Viun7g03531 674 FunFam Cysteine-rich receptor-like protein kinase 10 306 417 - -
Viun7g03531 674 FunFam cysteine-rich receptor-like protein kinase 10 418 619 - -
Viun7g03531 674 CDD STKc_IRAK 348 613 - -
Viun7g03531 674 SMART serkin_6 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03531 674 Pfam Salt stress response/antifungal 146 233 IPR002902 -
Viun7g03531 674 Pfam Salt stress response/antifungal 25 120 IPR002902 -
Viun7g03531 674 ProSiteProfiles Gnk2-homologous domain profile. 129 237 IPR002902 -
Viun7g03531 674 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 673 - -
Viun7g03531 674 SUPERFAMILY Protein kinase-like (PK-like) 328 641 IPR011009 -
Viun7g03531 674 Pfam Protein tyrosine and serine/threonine kinase 346 610 IPR001245 GO:0004672|GO:0006468
Viun7g03531 674 ProSiteProfiles Gnk2-homologous domain profile. 20 123 IPR002902 -
Viun7g03531 674 MobiDBLite consensus disorder prediction 246 271 - -
Viun7g03531 674 ProSiteProfiles Protein kinase domain profile. 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03531 674 Gene3D - 19 122 IPR038408 -
Viun7g03531 674 Gene3D - 138 237 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03531 Viun-Chr7 36778938 36782364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03531 28 674 Receptor kinase-like Gene Family AT4G21410 49.091 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03531 PK_Tyr_Ser-Thr 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03531 - - gmx:100791582 983.4