Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03530 ATGACTGCAATTTTCTTTCTCTTCTGTGTTTGTGTCATCGTAATCATATCGGGGGCCAGCGCTCAGACATCATGTGATAACAACAACGGCAACTACACAGTCAACAGCACTTACTACAACAACCTCAACATCCTCCTATCCAGTTTCTCTACCCACGCCGAAATCAACTACGGTTTCTACAACTTCTCTCATGGCCAAGGCACGGACAAAGCACACGCCGTTGGGGTCTGCAGAGGGGACCGTACACAGGAAGAATGCCTCAAATGTCTCAACGATTCCAGAGTGACTCTCACAAAGGAATGTCCAAACCAGAAAGAGGCAATTGTGTGGGATGGGGAATGCTCCTTGCGCTACTCTAACCGCTCCATAATTGGCCTCATGGAGAATCAACCTACGGTGCTGCTCTATTTAACGTTGGAAGTAAGGGGTTCGGTTGAGCAATTCAACGCAACGCTTAAAAGCTTGATGAGGAATCTAACACGCACAGCTGCGTCCGGTGACTCTCGTCGTAAGTATGCTACAGGAAGTGCATCTGCTCCTGATTTTCAAACAATATACGGTTACACGCAGTGCACGCCTGATTTGTCTTCCGAAGATTGCACCAAGTGTTTGGATGAAGCTGTCTCACAAATCCCAGATTGCTGTAGGGGCAGGGCTGGAGGCAATGTTTTGAAGCCCAGTTGTAGAATTAGATTTGACCCTTATCTCTTCTATGGACCCACACTCAAGCTAGACACAGATGCACCACCACCAACAACCACCCCACCACCCTCTCGCTTCACCAACAACACTTCTTTACATTCGCAAGTTGGAAAAAAAGAGGACAGTGACGATGAAGATGAAGTTACACTTGCTGAGTCATTGCAATTCAAATTTGAAACCATCCGAGTTGCCACAAATGAATTTGTTGATTCTAATAAGCTTGGACAGGGCGGGTTTGGAGCTGTCTACAAAGGTCAGCTTTCCGATGGACAATCAATTGCTGTCAAAAGGTTGTCAAGTGCTTCTGGGCAAGGAGATACAGAGTTCAAGAATGAAGTGCTTTTATTGGCTAAGCTTCAACACCGAAATTTAGTTAGACTAATTGGTTTCTGCTTGGAAGGAAGAGAAAGGCTGCTTATCTATGAATTTGTTCCTAACAAAAGTCTTGATTACTTCATATTTGATCCAATAAAGAAAACACAGTTGGATTGGCAAATGCGCTACCAAATTATTAGAGGTATTACAAGAGGCATTCTCTATCTCCATGAGGATTCTCAACTACGAATTATACACCGAGATCTCAAAGCAAGCAACATTCTCCTGGACGAAAACATGTGTCCTAAGATATCAGATTTTGGGATGGCAAGACTTTTTCACGTTGATCAGACTCAAGCAAATACACATAGAGTTGTTGGAACCTATGGATATATGGCTCCTGAGTATGCAATATACGGTCAGTTTTCAACAAAATCAGATGTTTTTAGTTACGGTGTGCTGGTTCTTGAGATTGTAAGTGGCCGAAAAAGCATTGGTGCTCGTCATGGGGAGACAGTGGAGGATCTATTGAGCTTTACATGGCGAAACTGGAAGAATGGAACAATTACAAATATTGTAGACCCCACATTAATCAACGGTTCGCGAAATGAAATGATGAGATGCATACACATTGGGTTACTATGTGTTCAAGAAGATATGGCTGCCAGACCAACCATGGCTTCTGTTGTTCTCATGCTTAATAGCTATTCTATCACTCTCCCAGTACCTTCTGAACCTGCATTTGTTGTGAGTAGTAGCACAAGAAGCTTTCCGAACATGTTGGCATGGGAGCATAATTCAAGGGAAACAGGATCGACTGAATCCACAAATAAATCAGCTCAATATTCAGTAAATGAGGCTTCAATTACTGAGCTATACCCTCGCTAG 1905 0.4341 MTAIFFLFCVCVIVIISGASAQTSCDNNNGNYTVNSTYYNNLNILLSSFSTHAEINYGFYNFSHGQGTDKAHAVGVCRGDRTQEECLKCLNDSRVTLTKECPNQKEAIVWDGECSLRYSNRSIIGLMENQPTVLLYLTLEVRGSVEQFNATLKSLMRNLTRTAASGDSRRKYATGSASAPDFQTIYGYTQCTPDLSSEDCTKCLDEAVSQIPDCCRGRAGGNVLKPSCRIRFDPYLFYGPTLKLDTDAPPPTTTPPPSRFTNNTSLHSQVGKKEDSDDEDEVTLAESLQFKFETIRVATNEFVDSNKLGQGGFGAVYKGQLSDGQSIAVKRLSSASGQGDTEFKNEVLLLAKLQHRNLVRLIGFCLEGRERLLIYEFVPNKSLDYFIFDPIKKTQLDWQMRYQIIRGITRGILYLHEDSQLRIIHRDLKASNILLDENMCPKISDFGMARLFHVDQTQANTHRVVGTYGYMAPEYAIYGQFSTKSDVFSYGVLVLEIVSGRKSIGARHGETVEDLLSFTWRNWKNGTITNIVDPTLINGSRNEMMRCIHIGLLCVQEDMAARPTMASVVLMLNSYSITLPVPSEPAFVVSSSTRSFPNMLAWEHNSRETGSTESTNKSAQYSVNEASITELYPR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03530 634 Gene3D - 19 122 IPR038408 -
Viun7g03530 634 Gene3D - 138 237 IPR038408 -
Viun7g03530 634 Pfam Salt stress response/antifungal 146 233 IPR002902 -
Viun7g03530 634 Pfam Salt stress response/antifungal 25 120 IPR002902 -
Viun7g03530 634 MobiDBLite consensus disorder prediction 243 278 - -
Viun7g03530 634 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Viun7g03530 634 FunFam Cysteine-rich receptor-like protein kinase 10 265 377 - -
Viun7g03530 634 Gene3D Transferase(Phosphotransferase) domain 1 378 579 - -
Viun7g03530 634 SMART serkin_6 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03530 634 SUPERFAMILY Protein kinase-like (PK-like) 288 601 IPR011009 -
Viun7g03530 634 FunFam cysteine-rich receptor-like protein kinase 10 378 579 - -
Viun7g03530 634 FunFam Cysteine-rich receptor-like protein kinase 10 133 237 - -
Viun7g03530 634 Gene3D Phosphorylase Kinase; domain 1 263 377 - -
Viun7g03530 634 ProSiteProfiles Gnk2-homologous domain profile. 129 237 IPR002902 -
Viun7g03530 634 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 19 123 - -
Viun7g03530 634 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03530 634 Pfam Protein tyrosine and serine/threonine kinase 306 570 IPR001245 GO:0004672|GO:0006468
Viun7g03530 634 CDD STKc_IRAK 308 573 - -
Viun7g03530 634 ProSiteProfiles Gnk2-homologous domain profile. 20 123 IPR002902 -
Viun7g03530 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Viun7g03530 634 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03530 Viun-Chr7 36778937 36782364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03530 25 634 Receptor kinase-like Gene Family AT4G38830 46.861 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03530 PK_Tyr_Ser-Thr 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03530 - - gmx:100791582 922.154