Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03526 ATGGCCACCAGTTATTGCGTGCTTGCTTTGTTTCTCTCTTGTCTAATTTCTCGAGCTAGAGCCCAGTACAACACCGAGTACTGTAATAACAACGAAGGGAACTACACAATCAATAGCACCTATCACAACAATCTCAACACCCTTCTATCCACGCTCTCTTCCCACACACAAATTAATTATGGTTTCTACAACTTCTCATATGGTCAAAACAATGACAAAGTAAACGCCATTGGGCTGTGCAGAGGAGATGTTAAGCAAGACGAGTGCCGCCGGTGCCTCAACGATTCTGCAGTCACAATCACACAGCTTTGTCCAAACCAGAAAGAGGCTCTTCTATGGTTGAACACTAGCAAATGTTTGTTGCGTTATTCTCACAGCACAATATTCGGTGTCGTGGAATCTTCTCCTTCGTTCTACTTGAGGAACAGTAACAATGTAACGGAAGCTGATAAGTTCAACCAAGCACTCTCCAACTTAATGAGGAATCTCACAGTGGTGGCTGCATCTGGTGACTCTCGTCGTAAGTATTCTACCGGTAGTGCAGCTGCTTCAAATTTTCAAACCGTATACGGTCTTGTGCAGTGCACCCCTGATTTGTCCGAGACAGACTGCAATAGATGCTTGGATGGGTGTATCTCAGAAATCCCATCGTGTTGTCAGGGCAGGATGGGTGCTAGAGTTCTTAGACCAAGCTGTAATATTAGATTCGAAAGCGCAATGTTCTACGATCAAACTCCTGAACTAGACCCTGATGTAACACCACCATCTCCGTCTCCTCCTTCCTCCGCAGGAAGCAGCAACACAATAACAATTGTCGTTGCCGTTGTTGTTCCTACTGTTGTTGTTGCTGTCGTTTTCCTCCTTTGTCTCTGCAGATATTTAAGGAGTAGGAAGGCAAGAAACAGTCTAACAGGTCAAGTTGACCAAGATGATGACATTGAAATTACTCAGTCATTGCAATTCGACTTCGACATAATACGAGTTGCTACAGAAGACTTCTCTAATTCTAATAAACTTGGAGAAGGTGGATTTGGAGCTGTTTACATGGCTAGGCTCCCCAATGAACAGATGATTGCAGTGAAAAGGTTGTCAAGTGGATCCAGCCAAGGAGACGCAGAATTTAAGAATGAAGTGCTTTTAGTGGCCAAACTTCAGCACAGAAATTTAGTCAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGGCTACTCGTCTATGAATTTGTTCCTAACAAAAGCCTTGATTATTTCATATTTGATCCAGCCAAGAAAGCACTGTTGGATTGGGCAATGCGATACAAAATCATAAGAGGTATTGCCCGAGGGCTTCTCTACCTTCACGAAGATTCTCTTCTGCGTATTATACATCGTGATCTCAAAGCAAGCAATATTCTCTTAGACGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGACTGGTTTTACTGGATCAAACTCATGCGAATACAAATAGAGTTGTGGGAACCTATGGATACATGGCACCGGAGTATATAATGCAAGGACAATTTTCGGTGAAGTCAGATATCTTTAGTTTTGGTGTACTGCTTCTTGAGATCGTAAGTGGCCAAAAAAACAGTGGCTTTCGTCATGGGGACAATGTGGAGGATCTATTGAGCTTCACATGGAGAAGCTGGAGAGAGGGAACAGCTGTAAACATTGTAGATCCATCATTGAACAACAATTCACGAAATGAAATGATGAGATGCATTCATATTGGTTTGCTCTGTGTTCAAGACAATTTAAGTGACAGACCAAGCATGGCAACCGTTATGCTGATGCTGAGTAGCTATTCTCTGAGTCTTCCCATCCCTTCTGAACCTGCATTTTATGCCCACAGTACAACTAGAAGCCTTCCGGCCACCATGTCATGGGGGCATAGTTCGAGGGCTACAACAAACGAATCAACCAACAAATCTGCTCAAGAGTCAGAAAATGAGAATTCAATTACTGAGCTGTACCCTCGCTAG 1995 0.4321 MATSYCVLALFLSCLISRARAQYNTEYCNNNEGNYTINSTYHNNLNTLLSTLSSHTQINYGFYNFSYGQNNDKVNAIGLCRGDVKQDECRRCLNDSAVTITQLCPNQKEALLWLNTSKCLLRYSHSTIFGVVESSPSFYLRNSNNVTEADKFNQALSNLMRNLTVVAASGDSRRKYSTGSAAASNFQTVYGLVQCTPDLSETDCNRCLDGCISEIPSCCQGRMGARVLRPSCNIRFESAMFYDQTPELDPDVTPPSPSPPSSAGSSNTITIVVAVVVPTVVVAVVFLLCLCRYLRSRKARNSLTGQVDQDDDIEITQSLQFDFDIIRVATEDFSNSNKLGEGGFGAVYMARLPNEQMIAVKRLSSGSSQGDAEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPAKKALLDWAMRYKIIRGIARGLLYLHEDSLLRIIHRDLKASNILLDEEMNPKIADFGMARLVLLDQTHANTNRVVGTYGYMAPEYIMQGQFSVKSDIFSFGVLLLEIVSGQKNSGFRHGDNVEDLLSFTWRSWREGTAVNIVDPSLNNNSRNEMMRCIHIGLLCVQDNLSDRPSMATVMLMLSSYSLSLPIPSEPAFYAHSTTRSLPATMSWGHSSRATTNESTNKSAQESENENSITELYPR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03526 664 ProSiteProfiles Gnk2-homologous domain profile. 23 128 IPR002902 -
Viun7g03526 664 CDD STKc_IRAK 339 599 - -
Viun7g03526 664 FunFam cysteine-rich receptor-like protein kinase 10 409 610 - -
Viun7g03526 664 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Viun7g03526 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 662 - -
Viun7g03526 664 ProSiteProfiles Protein kinase domain profile. 333 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03526 664 SUPERFAMILY Protein kinase-like (PK-like) 318 634 IPR011009 -
Viun7g03526 664 Gene3D - 20 127 IPR038408 -
Viun7g03526 664 Gene3D - 136 241 IPR038408 -
Viun7g03526 664 FunFam Cysteine-rich receptor-like protein kinase 10 136 241 - -
Viun7g03526 664 MobiDBLite consensus disorder prediction 245 264 - -
Viun7g03526 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Viun7g03526 664 SMART serkin_6 333 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03526 664 Gene3D Phosphorylase Kinase; domain 1 295 408 - -
Viun7g03526 664 ProSiteProfiles Gnk2-homologous domain profile. 134 241 IPR002902 -
Viun7g03526 664 MobiDBLite consensus disorder prediction 630 664 - -
Viun7g03526 664 FunFam Cysteine-rich receptor-like protein kinase 10 295 408 - -
Viun7g03526 664 Pfam Protein tyrosine and serine/threonine kinase 336 600 IPR001245 GO:0004672|GO:0006468
Viun7g03526 664 Pfam Salt stress response/antifungal 28 125 IPR002902 -
Viun7g03526 664 Pfam Salt stress response/antifungal 144 238 IPR002902 -
Viun7g03526 664 Gene3D Transferase(Phosphotransferase) domain 1 409 610 - -
Viun7g03526 664 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 21 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03526 Viun-Chr7 36754597 36757834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03526 8 664 Receptor kinase-like Gene Family AT4G21410 48.617 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03526 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03526 - - var:108324785 1043.49