Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03525 ATGAGAATGGCAGCAACCTCCTCCATGTTTATTTTATTTCTTTGTTTTCCATTTCTAAAATTGATATCTCTTGGCAGCGCCCAGGACTACTACTACGTATGTGACGACGGCCACGGCAACTACACAGCCAACAGCACCTACAGCACCAACCTCAACACTCTTTTATCCACTCTGTCTTCCGACACACAAATTAACTACGGTTTCTACAACTTTTCATATGGCCAAAACAGTGACATAGTAAACGCCATAGGACTGTGCAGAGGAGATGTTGAGTCCGAGGAGTGCCGCAGCTGCCTCAACAATTCCAGCGTCGATATAACACAGGCTTGTCCAAACCAGAAAAAGGCAATTCTGTGGTCCGAGCAATGCATGTTGCGCTACTCTAACGACACAATATTCAACCAAATGGAAACTTCTCCCTCTTATTACGCGTGGAACGTACAAAATGTAACAGAAGCGGATCAGTTCAGCGAAGTGCTCGATAACTTAATGAAGAACGTAAGAGACATAGCTGCATCAGGTGACTCTCGCCGTAAGTATGCTACGGCGGAAAATTCAACTGCTATAAATTTTCAAACCATATACGGTCTTGCGCAGTGCACCCCTGATTTGTCTCGGCAACAATGTGATCAATGCTTAGAGGGGGCTATCTCAGACATCCCAAACTGCTGCAATGGCAAGGAAGGTGGTAGAGTTCTTAGACCAAGTTGTAATATTAGATTTGAAGTTTACAGTTTCTACGGAACTGCAACAACGTTAGACCCGGATACGGAGGCACCTCCTCCGTCCACCAATACCACTTCCTCTCAAGAAAGTAGCAACACAACAATAATTGTCATTGCCGTAGTTGTGGCTACCGTTGTTGTTGTTATTTTGCTCATTTGTCTCTTCCTATATCTAAGGAGGAGGAAGGCAAGGAAAGATCTTGCAGTTAAAGAAGACGATGATGAGGATGAAATTAAAATTGCCGAGTCATTGCAATTCAACTTTGACACAATACGAGTAGCCACAGAAGACTTCTCTGATTCCAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACCGGGGTAGGCTGTCCAATGGACAGATGATTGCAGTGAAAAGGTTGTCAAGAGATTCTGGGCAAGGAGATACCGAATTTAAGAATGAAGTGGTTTTAGTGGTGAAGCTTCAGCACCGGAATTTAGTTAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGACTACTTGTCTATGAATTTGTTCCCAATAAAAGCCTTGATTATTTCATATTTGATCCAGCCAAGAAAGCACAGTTGGATTGGGAAAAGCGTTACCAAATCATTAGAGGTATTGCTCGAGGTCTTCTCTACCTTCACGAAGATTCTCAACTACGAATTATCCATCGAGATCTCAAAGCAAGCAACATTCTCTTAGATGAAGAGATGAATCCTAAGATAGCAGATTTCGGCATGGCAAGACTGGTTTTATTGGATCAAACTCAAGTAAACACAAGTCGAATTGTTGGAACCTATGGATATATGGCACCAGAGTATGCAATGCATGGACAGTTTTCGGTGAAATCAGACGTCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTAATAATGGGGAGAATATGGAGGATCTACTAAGCTTCGCTTGGAGAAACTGGAAGGAGGGGAAGGCCATAAATATTGTAGATCCATCACTCAACAGCAATTCACGGAATGAAATGCTGAGATGCATTCATATTGGCTTACTCTGTGTTCAAGAACATTTAATTGACAGACCGACCATGGCTACCATTATGCTGATGCTTAACAGCTATTCTCTGAGTCTCTCTATTCCTGCGGAACCTGCATTTTATATGAACAGTAGAACTAGAAGCTTTCCAGCGATGCAGTCATGGGAGTATAATTCAAGGGAAACGGGATCAAGTGAAGCGACACTTAAATCAGCTCAAGAATCAGAAAATGAAGCTTCAATTACTGAGCTATACCCTCGCTAG 2019 0.425 MRMAATSSMFILFLCFPFLKLISLGSAQDYYYVCDDGHGNYTANSTYSTNLNTLLSTLSSDTQINYGFYNFSYGQNSDIVNAIGLCRGDVESEECRSCLNNSSVDITQACPNQKKAILWSEQCMLRYSNDTIFNQMETSPSYYAWNVQNVTEADQFSEVLDNLMKNVRDIAASGDSRRKYATAENSTAINFQTIYGLAQCTPDLSRQQCDQCLEGAISDIPNCCNGKEGGRVLRPSCNIRFEVYSFYGTATTLDPDTEAPPPSTNTTSSQESSNTTIIVIAVVVATVVVVILLICLFLYLRRRKARKDLAVKEDDDEDEIKIAESLQFNFDTIRVATEDFSDSNKLGQGGFGAVYRGRLSNGQMIAVKRLSRDSGQGDTEFKNEVVLVVKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPAKKAQLDWEKRYQIIRGIARGLLYLHEDSQLRIIHRDLKASNILLDEEMNPKIADFGMARLVLLDQTQVNTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLILEIVSGQKNSGINNGENMEDLLSFAWRNWKEGKAINIVDPSLNSNSRNEMLRCIHIGLLCVQEHLIDRPTMATIMLMLNSYSLSLSIPAEPAFYMNSRTRSFPAMQSWEYNSRETGSSEATLKSAQESENEASITELYPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03525 672 FunFam Cysteine-rich receptor-like protein kinase 17 309 415 - -
Viun7g03525 672 Gene3D - 27 131 IPR038408 -
Viun7g03525 672 Gene3D - 138 246 IPR038408 -
Viun7g03525 672 CDD STKc_IRAK 346 611 - -
Viun7g03525 672 Gene3D Phosphorylase Kinase; domain 1 303 415 - -
Viun7g03525 672 ProSiteProfiles Protein kinase domain profile. 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03525 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 670 - -
Viun7g03525 672 MobiDBLite consensus disorder prediction 645 672 - -
Viun7g03525 672 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Viun7g03525 672 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 132 - -
Viun7g03525 672 Pfam Protein tyrosine and serine/threonine kinase 343 607 IPR001245 GO:0004672|GO:0006468
Viun7g03525 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Viun7g03525 672 Gene3D Transferase(Phosphotransferase) domain 1 416 619 - -
Viun7g03525 672 SUPERFAMILY Protein kinase-like (PK-like) 324 610 IPR011009 -
Viun7g03525 672 FunFam cysteine-rich receptor-like protein kinase 10 416 617 - -
Viun7g03525 672 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Viun7g03525 672 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Viun7g03525 672 Pfam Salt stress response/antifungal 148 243 IPR002902 -
Viun7g03525 672 MobiDBLite consensus disorder prediction 645 665 - -
Viun7g03525 672 SMART serkin_6 340 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03525 672 ProSiteProfiles Gnk2-homologous domain profile. 138 246 IPR002902 -
Viun7g03525 672 FunFam Cysteine-rich receptor-like protein kinase 10 140 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03525 Viun-Chr7 36749020 36752142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03525 9 672 Receptor kinase-like Gene Family AT4G21410 48.621 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03525 PK_Tyr_Ser-Thr 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03525 - - var:108324785 1073.15