Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03524 ATGAAACTTACCGAAGGAAATTCTGGTTATAAAGTGACAGCACCGATCATGATAATACGCAAAGCTTCAGTTAAGGTTGTTCGTTGTTCAGATTATGGGATGGGTGCCGTTTCTTGCATGCTTCTCTTCTTTCTCTGTTGTCTAATATCTGAAGCCAGCGCTCAGCTCTTCACTGTCTGTGATGACAACGACGGGAACTACACAGCAAATAGCACCTATAACAACAATCTCAACACCCTTTTATCCACTCTTTCTTCAAACACAGAAATCAACTATGGTTTCTACAACTTCTCTCATGGTCAAAACGCAGACAGAGTCAACGCCATTGGGCTGTGCAGGGGAGATGTGGAGCCAAATAAGTGCCGAAGTTGCCTCAAAGATGCCGGAGGCAATATCACACAGCTTTGTCCAAACCAGAAGCAGGCTATTATATATTATGACAACTGCCTTTTGCGCTACTCAAACCGCTCAATATTTGGGGTCATGGAAACTTCTTCTGGCTTTTATATGTCGAACGTAAACAATGCAACAGGAGCGGTTGAATTCAATCAAGTGCTCCAAAACTTAATGAGGGACCTCAAAGGCAAAGCAGCATCCGGTGACTCCCGTCGTAAGTATGCTACGGGTAATGACACAACTACCAATTTCCAAGCCGTATATGGTCTTGTGCAGTGCACCCCTGATTTGACTCAGACACAGTGCAATGATTGCCTGGATCAGGCTATCTCACAAATCCCAACTTGCTGCAACGACAAGATAGGTGGAAGAGTTGTTGAACCCAGTTGTAATATTAGATATGAAGACTACCGCTTCTACGAACAGACAACGATAATAGACCCAGAGACACCACCACCCACAGTTAACACTTCCACGGGAGAAAGTAGCAACACAACAACAATTGTCATTGCCGTAGTTGTGCCTACTGTTGTTGTTTTTCTCATCTGTTGTCTCTTCATGTGTTTAAGGAGGAGGAAGGCAAGGAAAAATCTTGAAGTTAAAAAAGAAGAAAGAGAAGAAGAACATGAAGAAGAGGATGAAATTAAAATTGCCGAGTCATTGCAATTCAACTTTGACACAATACGAGTTGCTACACAAGACTTCTCTGATTCTAATAAACTTGGACAAGGTGGTTTTGGAGCTGTTTACTTGGGTGAGCTCTCCAATGGACAGATAATTGCAGTGAAAAGGTTGTCAAGAGATTCTGGGCAAGGAGATACCGAATTTAAGAATGAAGTGGTTTTAGTGGTGAAGCTTCAGCACCGGAATTTAGTTAGGTTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGACTACTTGTCTATGAATTTGTTCCCAATAAAAGCCTTGATTATTTCATATTTGATCCAGCCAAGAAAGCACAGTTGGATTGGGAAAAGCGCTACAGAATCATTAGAGGTATTGCTCGAGGTCTTCTTTACCTTCACGAAGATTCTCAACTACGAATTATCCATCGAGATCTCAAAGCAAGCAACATTCTCTTAGATGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGACTGGTTTTATTGGATCAAACTCAAGCAAACACAAGTAGAATTGTTGGAACCTATGGATATATGGCACCAGAGTATGCAATGCATGGACAGTTTTCAGTGAAATCAGACGTCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTAATAATGGGGAGAATATGGAGGATCTACTAAGCTTCGCTTGGAGAAGCTGGAAGGAGGGGAAGGCTATAAATATTGTAGATCCATCACTCAACAGCAATTCAAGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACCATGGCTAACATTATACTGATGCTTAATAGCCATTCTCTGAGTCTCCCTATTCCTGCAGAACCTGCATTTTTTATGAACAGTAGAACTCGAAGCCTTCCAGAGATGCAGTCATGGGAGTATAATTCAAGGGAAACGGGATCAAGTGAAGCGATACTTAAATCAGCTCAAGAATCAGAAAATGAAGCTTCAATTACTGAGCCATACCCTCGCTAG 2100 0.4152 MKLTEGNSGYKVTAPIMIIRKASVKVVRCSDYGMGAVSCMLLFFLCCLISEASAQLFTVCDDNDGNYTANSTYNNNLNTLLSTLSSNTEINYGFYNFSHGQNADRVNAIGLCRGDVEPNKCRSCLKDAGGNITQLCPNQKQAIIYYDNCLLRYSNRSIFGVMETSSGFYMSNVNNATGAVEFNQVLQNLMRDLKGKAASGDSRRKYATGNDTTTNFQAVYGLVQCTPDLTQTQCNDCLDQAISQIPTCCNDKIGGRVVEPSCNIRYEDYRFYEQTTIIDPETPPPTVNTSTGESSNTTTIVIAVVVPTVVVFLICCLFMCLRRRKARKNLEVKKEEREEEHEEEDEIKIAESLQFNFDTIRVATQDFSDSNKLGQGGFGAVYLGELSNGQIIAVKRLSRDSGQGDTEFKNEVVLVVKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPAKKAQLDWEKRYRIIRGIARGLLYLHEDSQLRIIHRDLKASNILLDEEMNPKIADFGMARLVLLDQTQANTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLILEIVSGQKNSGINNGENMEDLLSFAWRSWKEGKAINIVDPSLNSNSRNEMLRCIHIGLLCVQENLVDRPTMANIILMLNSHSLSLPIPAEPAFFMNSRTRSLPEMQSWEYNSRETGSSEAILKSAQESENEASITEPYPR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03524 699 Gene3D Transferase(Phosphotransferase) domain 1 443 644 - -
Viun7g03524 699 FunFam Cysteine-rich receptor-like protein kinase 10 166 271 - -
Viun7g03524 699 Pfam Protein tyrosine and serine/threonine kinase 370 634 IPR001245 GO:0004672|GO:0006468
Viun7g03524 699 SMART serkin_6 367 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03524 699 Gene3D - 53 157 IPR038408 -
Viun7g03524 699 Gene3D - 164 271 IPR038408 -
Viun7g03524 699 MobiDBLite consensus disorder prediction 668 692 - -
Viun7g03524 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Viun7g03524 699 FunFam cysteine-rich receptor-like protein kinase 10 443 644 - -
Viun7g03524 699 ProSiteProfiles Gnk2-homologous domain profile. 164 271 IPR002902 -
Viun7g03524 699 Pfam Salt stress response/antifungal 60 155 IPR002902 -
Viun7g03524 699 Pfam Salt stress response/antifungal 174 269 IPR002902 -
Viun7g03524 699 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Viun7g03524 699 MobiDBLite consensus disorder prediction 668 699 - -
Viun7g03524 699 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 53 158 - -
Viun7g03524 699 ProSiteProfiles Protein kinase domain profile. 367 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03524 699 Gene3D Phosphorylase Kinase; domain 1 326 442 - -
Viun7g03524 699 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 56 695 - -
Viun7g03524 699 SUPERFAMILY Protein kinase-like (PK-like) 353 669 IPR011009 -
Viun7g03524 699 FunFam Cysteine-rich receptor-like protein kinase 17 335 442 - -
Viun7g03524 699 CDD STKc_IRAK 373 638 - -
Viun7g03524 699 Coils Coil 318 353 - -
Viun7g03524 699 ProSiteProfiles Gnk2-homologous domain profile. 55 158 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03524 Viun-Chr7 36742840 36745935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03524 41 699 Receptor kinase-like Gene Family AT4G21410 49.420 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03524 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03524 - - vra:106771832 1140.56