Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03521 ATGGTCTCTGAAACAGTGCTTTTTTTCCTGTCCCTTCTTGGTATTCTTATTTCTCAAGCTATTGCCGAGCCAGACTACCAATACAATTACACAATCTGCTACCAAAGTGGAGACTATGACCCTAATACCACCTACCAAACTAACCTCAATACTGTTCTTTCAAGGCTCACTTCCAACACCCAAATTGATAATGGCTTCTACAACTCCTCCTATGGCCAAGACTCTGATAGAGTCTACGCAACTGGCCTTTGTAGAGGAGATGTTAGCCCACATACCTGCCTTACTTGCCTCAATCATTCTACTTCCCTTCTCCTAAAGTACTGTCCACATCAGAAGGAAGCTGTGGGAGGATTTGATTTGTGCATGTTACACTATGCAGATGACTCGATATTTGGTTACCAAGATTCTAGTTTCCGCTTTTATTTTTGGTGGGAAGCTAATGTAACAGATTGGAATCAGTACAGTTATGTGCTGAACAAGTTGCTTTTCAAACTAAGAGAGAAAGCCGCATCAGCTGATTCCTTTAACAGAAATAAATTTGCTGCAGGAAATGCAACTGGTCCGAGTTCTGAAACTATATATGCCGTTGTTCAGTGCTCAACTGAATTGACTGAGGCAGAGTGCAATGACTGCTTAGGTGGTGCCTTTTCAGAAATATCCAAATATTGTAATAACAGAATTGGTGGCGGAATTGTTAAATTAAGCTGTAATTTCAGATATATGAACTCCAGCTTCTATGAGCCTACTGCGGAGACACTAGCACTACAATTGCCACCACAAGGATTTGCATCTCCTCCTTCATCCTCACCTACACCATACACCACTTCAAACTCTTCTCAGAGTACTTATCATGGAAAAAGCAACAGATCACAACCTGTCAACGCCAAGTACGTTGTGCCAATTATTGTCTTTACTGGGGTGCTGATTCTTATTTGCATCTATTTAAGATTATGGAAGCTAAGAAAGTATTTTGAGAGTGAAGCTAAGGTCGATGATAAAATTATACAATTAGAGTCGTCACGGTTTGACCTTGACACCATCAGAGTCGCTACAAACAACTTCTCTGATGCAAACAAGCTAGGACAAGGAGGATTTGGACCTGTTTACAAGGGCACACTCTTCAATGAACAAGTAGTAGCAATCAAAAGGTTATGTAGCAACTCTGGCCAAGGAGATATTGAGTTCAAGAATGAAGTACTGTTAATGTCAAGGCTTCAGCACAGAAATTTAGTTAAGCTCCTTGGTTTCTGTTTTGAAAGAGAAGAACGACTTCTTGTCTACGAGTTTCTTCCCAACAAAAGTCTTGACAACCACATATTTGATCACATCGGGAGAGCACATTTGGATTGGAAAAAACGCTACGGTATAATTAAAGGCATTGCTTATGGTCTTCTTTATCTTCATGAGGATTCTCAGCAGAGGATTATTCACCGAGATCTCAAACTGAGCAATATTCTTTTAGATGATAACATGAATCCTAAGATTTCAGATTTTGGTTTTGCAAGGCTTTTTAATGTGGATCAAACACAGTTTAATGCAAGTAAAATTGCAGGAACCTATGGATACATGGCACCTGAGTATGCGAGGCATGGAAAACTCTCGATGAAGTTAGATGTCTTCAGTTTTGGTGTAATAATGCTAGAGATTGTAAGTGGCCAAAAGAATAGTGGATTTCGTAATGGAGAGAATGCAGAGCATCTATTAAGCTTAGCTTGGAAAAACTGGATGAAAGGGAGAATAGCTAATATTATAGATCCCGCCTTACATAATGGTTTGAGAGATGAAATAGTGAGATGCATTCACATTGGACTACTTTGTGTACAAGAAAAGGCTGCTGATAGACCAACAATGGCATCAGTGGTGCTTATGCTTGATAGCCACTCTTTTGCTCTACCAGTTCCATTGCAACCTGCTTATTTTATGAAAAATAGCTGTTTATCAGTTATCCAGTTTTCGAGGTATGGTTCTACAGAAACAGGGTCAAGTGAACAGAAAAGTTATTGTGCTGATGGATCAGCTAATGAGGCTTCAATTAGCAGTCTATATCCTCGTTAA 2055 0.3961 MVSETVLFFLSLLGILISQAIAEPDYQYNYTICYQSGDYDPNTTYQTNLNTVLSRLTSNTQIDNGFYNSSYGQDSDRVYATGLCRGDVSPHTCLTCLNHSTSLLLKYCPHQKEAVGGFDLCMLHYADDSIFGYQDSSFRFYFWWEANVTDWNQYSYVLNKLLFKLREKAASADSFNRNKFAAGNATGPSSETIYAVVQCSTELTEAECNDCLGGAFSEISKYCNNRIGGGIVKLSCNFRYMNSSFYEPTAETLALQLPPQGFASPPSSSPTPYTTSNSSQSTYHGKSNRSQPVNAKYVVPIIVFTGVLILICIYLRLWKLRKYFESEAKVDDKIIQLESSRFDLDTIRVATNNFSDANKLGQGGFGPVYKGTLFNEQVVAIKRLCSNSGQGDIEFKNEVLLMSRLQHRNLVKLLGFCFEREERLLVYEFLPNKSLDNHIFDHIGRAHLDWKKRYGIIKGIAYGLLYLHEDSQQRIIHRDLKLSNILLDDNMNPKISDFGFARLFNVDQTQFNASKIAGTYGYMAPEYARHGKLSMKLDVFSFGVIMLEIVSGQKNSGFRNGENAEHLLSLAWKNWMKGRIANIIDPALHNGLRDEIVRCIHIGLLCVQEKAADRPTMASVVLMLDSHSFALPVPLQPAYFMKNSCLSVIQFSRYGSTETGSSEQKSYCADGSANEASISSLYPR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03521 684 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Viun7g03521 684 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03521 684 FunFam Cysteine-rich receptor-like protein kinase 28 430 632 - -
Viun7g03521 684 Gene3D Phosphorylase Kinase; domain 1 318 429 - -
Viun7g03521 684 MobiDBLite consensus disorder prediction 261 290 - -
Viun7g03521 684 SUPERFAMILY Protein kinase-like (PK-like) 335 624 IPR011009 -
Viun7g03521 684 Pfam Protein tyrosine and serine/threonine kinase 358 621 IPR001245 GO:0004672|GO:0006468
Viun7g03521 684 Gene3D - 26 129 IPR038408 -
Viun7g03521 684 Gene3D - 135 245 IPR038408 -
Viun7g03521 684 ProSiteProfiles Gnk2-homologous domain profile. 136 245 IPR002902 -
Viun7g03521 684 FunFam Cysteine-rich receptor-like protein kinase 10 139 245 - -
Viun7g03521 684 CDD STKc_IRAK 360 625 - -
Viun7g03521 684 MobiDBLite consensus disorder prediction 267 290 - -
Viun7g03521 684 Gene3D Transferase(Phosphotransferase) domain 1 430 630 - -
Viun7g03521 684 FunFam Cysteine-rich receptor-like protein kinase 10 318 429 - -
Viun7g03521 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Viun7g03521 684 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 130 - -
Viun7g03521 684 SMART serkin_6 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03521 684 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 681 - -
Viun7g03521 684 Pfam Salt stress response/antifungal 149 242 IPR002902 -
Viun7g03521 684 Pfam Salt stress response/antifungal 33 127 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03521 Viun-Chr7 36729272 36732496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03521 5 684 Receptor kinase-like Gene Family AT4G21410 43.266 3.88e-179 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03521 PK_Tyr_Ser-Thr 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03521 - - gmx:100790532 1026.93