Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03520 ATGACAAAGGCTATGGCTGCACTTTCTTTGAGGCTCCTTTCTTTTCTTTGTTGTCTCTTTCTCATATTCATATCGGAAGCTAGCGATTGGGTATGCGATTACAGCAAAGTCGGAAACTACACAGTGAACAGCCCGTATCACAAAAACCTCCACACCCTTTTATCCAGTTTCTCTTCCCGCACAGAAATCAACTACGGTTTCTACAATTTCTCATATGGTCGAGACCCAGACAAAGTGTATGCCGTTGGGCTCTGCAGAGGCGATCAAAAACAGGATGAATGCCTCAACTGTCTCAACCACACCAGAGGCGTTTTAGCAGAGCACTGTCCAAACCAGAAAGAAGCAATTGGGTGGGGTGCAGAGTGCATGTTACGCTACTCAAACCGCTCCATAATTGGCATTGTGGAAAATGAACCTTTTCAGGTACCATTTTACACATTGAATGTAACGGGTCGGGTGAACCCATTCAATGCAGTGCTTCAAAGCTTGATGAGGAATCTAACAAGCATAGCTGCATCAGGTGACTCTCGTCGAAAGTATGCTACAGGCAGTGCACCTGCTCCAGAATTTCAAAAAATATATGGTTACACGCAGTGCACGCCTGATTTGACATCTGAAGATTGCACTAACTGCTTGAAGGAAGCTATGGCGTTGATCCTTGATTGTTGTAGTGGACGGTCTGGAGGCATTGTTTTAAAACCCAATTGTAGAATTAGATTTGACCCCAAAATCTTTTACGGACCTACGGTGAAGTTGCTCCCATATGCGCCAGCGCCAGCGCCACCATCACCATCCACCACCAACGCCTCTTCCTCACAAGGAAAGAGCCACACATCACGAACCGTTATCACCATAGCAGTGCCAGTTGCCTGTTTTGTTTTGGTGTTCCCTCTTCTATGCATCTATTTAAGTGGGAGGAAGCCAAGAAAAAAGGATGAATTTAAAAGAGAAGAAGATAGTGATGATGAAATTACATTTATTGAGTCACTGCAATTCAACTTTGACACCTTACGAGTTGCTACAAATGAATTTGCTGAGTCTAACAAACTTGGACACGGTGGGTTTGGAGTTGTTTACAGAGGTAAGCTAAGCAACGGACAAATGATTGCTATGAAAAGGTTGTCAAGGGGTTCTGGGCAAGGACATGTGGAGTTTAAAAATGAAGTAGTTTTAGTCACCAAGCTTCAGCACCGAAATTTAGTTCGGTTACTTGGGTTCTGTTTTGAAGGACAAGAACGACTCCTTGTGTATGAGTATCTTCCCAATAGAAGTCTTGACAACTTCATATTTTATCCCACGAAGCATGCACATTTAGATTGGAAAACACGCTACAAAATAATTGGAGGCATTGCTGGAGGTCTTCTTTATCTTCATCGGGATTCTCGACAACGGATCATCCATTGTGATCTCAAATTGAGTAATGTTCTTTTAGATGCCCAAATGAATCCCAAGATTTCAGACTTTGGCTTGGCAAAGTTGTTTGAGATAGAACTTACTCACGCAAGTAAAATTGCAGGAACATTGGGATACATGGCACCTGAGTATGCAAGGCATGGAAAACTCTCAATGAAGTTAGATGTATTTAGTTTTGGTGTAATACTACTAGAGATTGTAAGTGGCCAAAAGAATGGTGGATTCCGAAATGGGGAGAATGTGGAGCATCTACTAAGCTTTGCTTGGAAAAACTGGAGGAAAGGGACGGCAGATAGTATTATAGATCCTGTCTTAAATAATGCTTTGAGAGGAGAAATAGTGAGATGCATTCACATTGGACTACTTTGTGTTCAAGAAAAAGCTGATGATAGACCAACAATGGCTGAGGTGGTGCTTATGCTTGATAGCCACTCTTTTTCTCTACCAGTTCCATTGCAACCTGCCTATTTTATGATTAATGGATGTTCATCAGTCATTCAGTTTTCGGAGTTCGGTTCTGTGGAAACAGGATCAAATGAACAGAAAATTGACTTTGCTGATGCATCAACAAACGAGGTTTCAATTAGTGGTTTATATCCTCGTTAG 2019 0.4205 MTKAMAALSLRLLSFLCCLFLIFISEASDWVCDYSKVGNYTVNSPYHKNLHTLLSSFSSRTEINYGFYNFSYGRDPDKVYAVGLCRGDQKQDECLNCLNHTRGVLAEHCPNQKEAIGWGAECMLRYSNRSIIGIVENEPFQVPFYTLNVTGRVNPFNAVLQSLMRNLTSIAASGDSRRKYATGSAPAPEFQKIYGYTQCTPDLTSEDCTNCLKEAMALILDCCSGRSGGIVLKPNCRIRFDPKIFYGPTVKLLPYAPAPAPPSPSTTNASSSQGKSHTSRTVITIAVPVACFVLVFPLLCIYLSGRKPRKKDEFKREEDSDDEITFIESLQFNFDTLRVATNEFAESNKLGHGGFGVVYRGKLSNGQMIAMKRLSRGSGQGHVEFKNEVVLVTKLQHRNLVRLLGFCFEGQERLLVYEYLPNRSLDNFIFYPTKHAHLDWKTRYKIIGGIAGGLLYLHRDSRQRIIHCDLKLSNVLLDAQMNPKISDFGLAKLFEIELTHASKIAGTLGYMAPEYARHGKLSMKLDVFSFGVILLEIVSGQKNGGFRNGENVEHLLSFAWKNWRKGTADSIIDPVLNNALRGEIVRCIHIGLLCVQEKADDRPTMAEVVLMLDSHSFSLPVPLQPAYFMINGCSSVIQFSEFGSVETGSNEQKIDFADASTNEVSISGLYPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03520 672 Gene3D Transferase(Phosphotransferase) domain 1 420 618 - -
Viun7g03520 672 SMART serkin_6 344 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03520 672 FunFam cysteine-rich receptor-like protein kinase 10 420 619 - -
Viun7g03520 672 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Viun7g03520 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Viun7g03520 672 Gene3D - 28 130 IPR038408 -
Viun7g03520 672 Gene3D - 143 245 IPR038408 -
Viun7g03520 672 ProSiteProfiles Gnk2-homologous domain profile. 137 245 IPR002902 -
Viun7g03520 672 FunFam Cysteine-rich receptor-like protein kinase 10 306 419 - -
Viun7g03520 672 ProSiteProfiles Protein kinase domain profile. 344 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03520 672 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Viun7g03520 672 Pfam Salt stress response/antifungal 32 128 IPR002902 -
Viun7g03520 672 Pfam Salt stress response/antifungal 154 241 IPR002902 -
Viun7g03520 672 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Viun7g03520 672 Pfam Protein kinase domain 345 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03520 672 SUPERFAMILY Protein kinase-like (PK-like) 329 630 IPR011009 -
Viun7g03520 672 CDD STKc_IRAK 350 613 - -
Viun7g03520 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 668 - -
Viun7g03520 672 Gene3D Phosphorylase Kinase; domain 1 307 419 - -
Viun7g03520 672 FunFam Cysteine-rich receptor-like protein kinase 10 141 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03520 Viun-Chr7 36725002 36728335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03520 38 672 Receptor kinase-like Gene Family AT4G21410 46.933 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03520 Pkinase 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03520 - - gmx:100788472 844.343