Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03519 ATGGTCTCTCCGAGTGTTCTTTCTTTCCTTTTTCTACTCTTTACTCTCACCTCTCTGGCTAATGCTAACCCAGAATATCCATACGCTGTTTGCGTCGCAGAAGGTGGAGAGTATGCTCCTGATAGCACTTACCAGACCAACCTCCACACTGTTCTTTCAAGGATCATTTCCGATACTCAGATTGACTATGGCTTCTACAACTCCTCCTATGGCCAAAACTCTGATAGAGTCTACGCAACTGCCCTTTGCAGAGGAGATGTCACCGCACATACTTGCCTTACTTGCCTCAACAATTCTCGTTCACTTCTCCTAAAACAGTGTCCGCGTCAAAAACGTGCGGTGGGAGGATATGGTGAATGCATGTTGCACTATTCATATCGCTCAGTGTTAGGTTACTATGATTCTGATTTCCGGGTCTACTTGCGGAGTGAAACCAATGTAACAGACTGGGACAAGTACAGTTATGTGCTGAAGAAGTTGCTGCCACTACTAAAAGTGAAAGCTGCAACAACTGATTCCAACTTGAATCGTAAATATGCTTCTGGAAATGCAACAGCTCCGGATTCTCAAACTGTATATGCTGCCGTTCAGTGTGCACCAGACTTGACAGTGGCAGAATGCAATGACTGCTTAGGTGGCGCTATTTCAGAATTACCAAAATGTTGTAATAGCAGATCTGGTGGAGTGGTTATTAAATTCAGGTGTAATTTCAGATACGAGAACTTCAGTTTCTATGAGCCTACGGCTGATACACAAACGCTACAGTTGTCACCACAAGGATCTCCATCTCCTCCTCCTTCACCTTCTCCATTCACCACTACAAATTCCCCAGAGAGTACTTATCATGGAAAAAGCAACAAATCACAAGCTGTCATTGCGAAATACGTTGTGCCTATTGTTGTCTTTTTTGGGTTGCTGATCTTTATGTGCATCTATTTAGGAGTGAGGAAGCCAACAAAACATTTTCAGAGTGATGACGGTGAAGTTAGACAAGTAGAGTCGTCACTAATAAATTTTGACACCATCAGAGTCTGTACAAACAACTTTTCTGACGCAAACAAGATTGGACAAGGTGGATTTGGACGTGTTTACAAGGGGAAGCTCTTCAATGAACAAGAAGTAGCAATCAAAAGGTTATGTAGCATCTCTGGGCAAGGAGATACTGAATTCAAGAATGAAGTGCTTTTAATGTCAAGACTTCAACACAGAAATTTAGTAAAGCTCCTTGGTTTCTGTTTTGAAAGAGAAGAACGACTCCTTGTGTATGAGTTTCTTCCGAATAAAAGCCTTGACAACTTCTTATTTGATCCCATCAAGCGCGCACATTTGGATTGGAAAACACGTTACAAAATAATTGAAGGCATTGCACGTGGCCTTCTATATCTTCATGAGGATTCTCAGCAGAGGATTATTCACCGTGATCTCAAATTGAGTAATATTCTTTTAGATGCAGATTTGAATCCAAAAATTTCAGATTTTGGCTTTGCAAGACTTTTTAATGTGGATCAAACTCAGGTTAAAGCAAGTAAAATTGCTGGAACCTACGGATACATGGCACCTGAGTATGCAAGGCATGGAAAACTCTCAATGAAGTTAGATGTATTTAGTTTTGGTGTAATACTACTAGAGATTGTAAGTGGCCAAAAGAATGGTGGATTCCGAAATGGAGAAAATGTGGAGCATCTACTAAGCTTTGCTTGGACAAACTGGAGAAATGGGAGAGCAGCTAATATTATAGATCCCACCTTAAATAATGGTTTGGGAGATGAAATAGTGAGATGCATTCACATTGGACTACTTTGTGTTCAAGAAAAGGTTGCTGATAGACCAACAATGGCTGAGGTGGTCCTTATGCTTGATAGCCACTCTTTCGCTCTACCAGTTCCATTGCAACCTGCTTATTTTATGAAACATAGTTGTTTATCGGTCATCCAGTTTTCGAGGTGTAGTTCTATGGAAACAGGGTCAAGTGAACAGAAAAGTTACTGTGCTGATGGATCAGCTAACGAGGCTTCAATTAGTAGTTTATATCCTCGTTAG 2040 0.4098 MVSPSVLSFLFLLFTLTSLANANPEYPYAVCVAEGGEYAPDSTYQTNLHTVLSRIISDTQIDYGFYNSSYGQNSDRVYATALCRGDVTAHTCLTCLNNSRSLLLKQCPRQKRAVGGYGECMLHYSYRSVLGYYDSDFRVYLRSETNVTDWDKYSYVLKKLLPLLKVKAATTDSNLNRKYASGNATAPDSQTVYAAVQCAPDLTVAECNDCLGGAISELPKCCNSRSGGVVIKFRCNFRYENFSFYEPTADTQTLQLSPQGSPSPPPSPSPFTTTNSPESTYHGKSNKSQAVIAKYVVPIVVFFGLLIFMCIYLGVRKPTKHFQSDDGEVRQVESSLINFDTIRVCTNNFSDANKIGQGGFGRVYKGKLFNEQEVAIKRLCSISGQGDTEFKNEVLLMSRLQHRNLVKLLGFCFEREERLLVYEFLPNKSLDNFLFDPIKRAHLDWKTRYKIIEGIARGLLYLHEDSQQRIIHRDLKLSNILLDADLNPKISDFGFARLFNVDQTQVKASKIAGTYGYMAPEYARHGKLSMKLDVFSFGVILLEIVSGQKNGGFRNGENVEHLLSFAWTNWRNGRAANIIDPTLNNGLGDEIVRCIHIGLLCVQEKVADRPTMAEVVLMLDSHSFALPVPLQPAYFMKHSCLSVIQFSRCSSMETGSSEQKSYCADGSANEASISSLYPR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03519 679 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 676 - -
Viun7g03519 679 Gene3D Phosphorylase Kinase; domain 1 314 424 - -
Viun7g03519 679 CDD STKc_IRAK 355 620 - -
Viun7g03519 679 Gene3D Transferase(Phosphotransferase) domain 1 425 625 - -
Viun7g03519 679 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Viun7g03519 679 FunFam Cysteine-rich receptor-like protein kinase 10 315 424 - -
Viun7g03519 679 MobiDBLite consensus disorder prediction 253 283 - -
Viun7g03519 679 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Viun7g03519 679 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Viun7g03519 679 SUPERFAMILY Protein kinase-like (PK-like) 332 619 IPR011009 -
Viun7g03519 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Viun7g03519 679 Pfam Salt stress response/antifungal 31 125 IPR002902 -
Viun7g03519 679 Pfam Salt stress response/antifungal 145 241 IPR002902 -
Viun7g03519 679 SMART serkin_6 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03519 679 FunFam Cysteine-rich receptor-like protein kinase 28 425 627 - -
Viun7g03519 679 Gene3D - 134 244 IPR038408 -
Viun7g03519 679 Gene3D - 26 128 IPR038408 -
Viun7g03519 679 ProSiteProfiles Gnk2-homologous domain profile. 135 244 IPR002902 -
Viun7g03519 679 Pfam Protein tyrosine and serine/threonine kinase 353 616 IPR001245 GO:0004672|GO:0006468
Viun7g03519 679 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03519 679 FunFam Cysteine-rich receptor-like protein kinase 10 137 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03519 Viun-Chr7 36720691 36723980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03519 31 679 Receptor kinase-like Gene Family AT4G21410 45.156 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03519 PK_Tyr_Ser-Thr 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03519 - - gmx:100790058 1093.18