Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03518 ATGCTAGCCTCCAACTTCTGTACAACCTCGTTAACACTTCAATTACTATGTCTGCTCTTTCATGCAACTGCATCGGCAGCAGTTTACAGTGCCCACTTCTGCACCAATCAAACCTTTTACGCATCCGACACCAAATTTCAATCCAACTTAAATACCCTCCTCTCTTCTCTTGTTTCAAACTCCTCCCTTCCCTCCCTCAACGGTTTCTTCCGAACCTCCGTCGATGACATCGACGGCCGTTTCCTCTGCCGGGGCGACGTCAACGCAACCGTCTGCCACGGCTGCGTCGCCGCAGCAGCAGCGAACATAACTCGCCTCTGTCCCAACGATACCGAGTCCTACATCTGGTACGACGAGTGTATGCTAATCTACTCCAACAGCACCTTCGACAATGATGACATAGTTCCCGGGATTCCCCTCAACGACGAAGGAAGCACCGTTAACACAAATCACGACCACTTCAACCAATTACTGTCGAACTTATTAAACACTTTGGAGGGAAAAGCTTTGGAGAGTGAGAAGAAGTTCGCCGCAGGAGCGGTGAGTGTGACGAGCGCGCAAACGCTGTATGGAATGGCGCAGTGCGAGCCAGACTCAACGAGTGGTCGTTGTGAGGCGTGCTTTGGAAGCGCAATTTCAAGTATTCCAAACTGTTGCAACGGAAGCGGAGGAGCAAGGGTTCTGCTTCCCTTATGTAGCATCAGATACCAACTGTATCCCTTTTTGTACAATTCCACCATGGTCATTCCTTCTTCAGAGGTCCCTCGGGCAGGAAGCAAAAGTACATTGGTGGTTGTGGCAATTGTTCTCCCTGCTATTTCGGCGATGCTTTTGTTTATAGGATGCTGTTGGTGGCGAAGAAGGCAAACAAAAAGAAAAAATCTTGAGGATGTCCAGGAAGTGAATGATAGCATTAGGAGATATTTGACTAGTGAGGAAGAGTCTTTGCATTTTGACTTGGCTACAATCGAAGCAGCCACAAATAGTTTCTCAGATGAAATGAAGATAGGAGAAGGTGGATTTGGTGCAGTTTATAAGGGTACCTTTCCCAATGGAGAAGAGATAGCTGTGAAGAGGCTATCAAGAACCTCCCTCCAAGGTGACAGAGAATTCAAGAACGAGGTTCTACTTGTTGCTCAGCTTCAACACAGAAATTTAGTTAGACTTTTAGGCTTTTGTATGGAGAAAACAGAGAGAATACTGGTTTACGAGTTTATCAAAAATTCCAGCCTCGACCACTTTCTATTTGGTCACGAAGACCAAGGAGTGCTAGACTGGGCAAGACGTTACAACATTATAGTTGGGATTGCACGAGGAATTCAATATCTTCATGAAGATTCTCGACTAAAAGTAATACACCGTGATCTCAAGGCATCTAATGTTTTATTAGATGCCGATATGAATCCAAAGATTTCCGACTTTGGAATGGCAAAGGTTTTTCATGGAAATCAAAGTCAAGAAAATACAAGAACAGGAAGAGTAGTTGGAACTTTTGGTTACATGTCTCCTGAATATGCCATGCATGGGAAATTCTCAGTGAAATCCGACGTGTTCAGTTTTGGAGTGTTGGTTTTGGAGATCCTTAGCGGCAAGAAGAACACAAGTTACTATCGATCACATGAGGACAATGATGATGACCTTTTGAGCTTTGCTTGGAAGAATTGGATAGATCGAACACCTTTCCAGATATTGGATCCAAAATTGAGAGGTTCTTATTCTAGAAATGAAGTTCAGAGATGCATCCATATTGCTTTGTTATGTGTTCAAGAAAACCCAGTTGAGAGACCTTCAATGGCGACAATAATGCTTGCATTGAACTCTTATTCAGTGACTTTAGGGTTTCCCAGACAGCCAGCATCTCTTGTGAGAGGAAGAGCAACAAAAGAGAGATTAAGACACCAGCTTGATTCTGATCACTCCAACAGTTCTTCAATCCCTTTTTCTGCTGCTGATTCATTGATCACTCAAGTATATCCTCTTATAGTAATTCCCAACCCAAAATCTTGTGTTGTGCGCGAAACGATGTTTTGGCGCAACATGTTCCTCTCCAGCTCCACCAACCACGTTACCTTTCTTCTGTCCCTGTCTCTCTTGGTAATGGAACCGATTTGTTCCTCTGCAGCTCCGGTTTACAATTACTGTCCAACCAACGCATCCTACAATTCCAGCGCTACATTCGAAAATAATCTCAAATTCCTTTTCCAATCTCTTCTCTCCAACATTTCCCAATCCGACGGCTCCTATTCCACCTTCATGGGCTTGGGGACCGCAAGCGTCGCCAGCGGCTCTTTCCTCTGCCGCGGCGACGTCTCCCTTGCCACCTGTAACGACTGCATAACCACCGCCGTCACCGAAATAACACAACTCTGCCCCAACAAAACAGAGTCCATAATATGGTACGACGAGTGCATGCTCCGTTTCACCAACACCTACTACAACCCCATCAACATCGAACCGGGAGCCAGCTTGTCGAACGATGAAAACATCTCCGCCTCCGACTTGGTCAGCTTTAACAGCACGTTGTTCGGCTTGTTGGACGATTTGGTGGAAGAGAGTGCGAATTCTAACTCGGCGAGGAAATTCGCCACCGGCGATAGAGAATTCGCCGGATCCTCGCCTCGGAGAAGGGTGTACGCCCTGACGGAGTGCGACCCGTCCTTCACGAATAGTGTGTGTGAAGAGTGTTTGCAAAACGCCATTTCAACTCTTCCTTCGTGCTGCGAAGGAAAACAGGGCGCGAGGGCTCTGCTTGCAATGTGCAATGTTAGATACGAATTGTTTCAGTTTTACAATACGAGTGCCACGTCAGCATCCTCATCAGGAAATAGCAATTATGTATTACGAGTAATCTTCATTGTTGCCCTCGTTATTGTGTCGATAATTCTCGTATGTGGTGTCTGCTATTTCATATTCAAAAGATCAAAGAAGAAATACAACACTCTTCTAAGGGAAAATTTTGGAGAAGAAAGTTCTACTTTGGAGTCGTTACAATTTGATTTAGCCATAATAGAAGTTGCCACAAAGAAGTTTTCACATGAAAACAGGATAGGTGAAGGTGGATTTGGAGATGTTTATAAGGGTATCCTTCCAGATGGACGAGAAATAGCAGTTAAAAAACTTTCACATAGTTCAGGCCAAGGTGCAGCAGAATTCAAGAATGAGATTTTGTTAATAGCAAAACTTCAACATAAAAATTTAGTGACATTGTTAGGATTTTGTTTGGAAGCTGAAGAAAAGATGCTTATTTATGAATTTGTGCCTAATAAAAGCCTAGACTACTTTCTATTTGATTCATACAAAAGTAGTCAAATGAAGTGGTCAGAACGTTACAAAATTATTCAAGGAATTAGCCAAGGAATTTTATATTTACATGAACATTCACGATTGAAAGTTATACACCGTGATCTCAAACCTAGCAATATTTTATTGGATGACAACATGAATCCAAAGATTTCAGATTTTGGATTGGCAAGAATTGTTGGTGTAGATCAATATCAAAGAAAAACAAATAGAATCGTGGGAACATATGGATATATGTCACCCGAATATGCTATGCATGGACAATTTTCAGAAAAGTCCGATGTTTTCAGTTTTGGAGTTATAATACTAGAAATAGTTAGCGCTAAAAAGAATGCAAGAGATGTTTTCTCAGACGATGATGACCTCTTGAGCTATGCTTGGGATCAATGGAGGGATCGGACACCATTAAACATATTAGACCAAAATATTAAGGAATCCTGCAATCACAGTGAAGTCATAAAATGCATCCAAATAGGTTTATTATGTGTACAAGAGAAGCCGCATGACAGACCTACAATGACACAAGTTGTTTCATATCTCGGTAGCTCTTTGTCTGAGTTACCATTTCCTGAAAAACCCATAAATTCTAATCAAAGTGGACTAGTTCAAAAGATGATAGCAAGAGGATCTAGTTCAGGTTCTGCACAAACAATGAATGAAATGTCTGTGAGCATATTTATCCCTCGGTAG 3990 0.4273 MLASNFCTTSLTLQLLCLLFHATASAAVYSAHFCTNQTFYASDTKFQSNLNTLLSSLVSNSSLPSLNGFFRTSVDDIDGRFLCRGDVNATVCHGCVAAAAANITRLCPNDTESYIWYDECMLIYSNSTFDNDDIVPGIPLNDEGSTVNTNHDHFNQLLSNLLNTLEGKALESEKKFAAGAVSVTSAQTLYGMAQCEPDSTSGRCEACFGSAISSIPNCCNGSGGARVLLPLCSIRYQLYPFLYNSTMVIPSSEVPRAGSKSTLVVVAIVLPAISAMLLFIGCCWWRRRQTKRKNLEDVQEVNDSIRRYLTSEEESLHFDLATIEAATNSFSDEMKIGEGGFGAVYKGTFPNGEEIAVKRLSRTSLQGDREFKNEVLLVAQLQHRNLVRLLGFCMEKTERILVYEFIKNSSLDHFLFGHEDQGVLDWARRYNIIVGIARGIQYLHEDSRLKVIHRDLKASNVLLDADMNPKISDFGMAKVFHGNQSQENTRTGRVVGTFGYMSPEYAMHGKFSVKSDVFSFGVLVLEILSGKKNTSYYRSHEDNDDDLLSFAWKNWIDRTPFQILDPKLRGSYSRNEVQRCIHIALLCVQENPVERPSMATIMLALNSYSVTLGFPRQPASLVRGRATKERLRHQLDSDHSNSSSIPFSAADSLITQVYPLIVIPNPKSCVVRETMFWRNMFLSSSTNHVTFLLSLSLLVMEPICSSAAPVYNYCPTNASYNSSATFENNLKFLFQSLLSNISQSDGSYSTFMGLGTASVASGSFLCRGDVSLATCNDCITTAVTEITQLCPNKTESIIWYDECMLRFTNTYYNPINIEPGASLSNDENISASDLVSFNSTLFGLLDDLVEESANSNSARKFATGDREFAGSSPRRRVYALTECDPSFTNSVCEECLQNAISTLPSCCEGKQGARALLAMCNVRYELFQFYNTSATSASSSGNSNYVLRVIFIVALVIVSIILVCGVCYFIFKRSKKKYNTLLRENFGEESSTLESLQFDLAIIEVATKKFSHENRIGEGGFGDVYKGILPDGREIAVKKLSHSSGQGAAEFKNEILLIAKLQHKNLVTLLGFCLEAEEKMLIYEFVPNKSLDYFLFDSYKSSQMKWSERYKIIQGISQGILYLHEHSRLKVIHRDLKPSNILLDDNMNPKISDFGLARIVGVDQYQRKTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIILEIVSAKKNARDVFSDDDDLLSYAWDQWRDRTPLNILDQNIKESCNHSEVIKCIQIGLLCVQEKPHDRPTMTQVVSYLGSSLSELPFPEKPINSNQSGLVQKMIARGSSSGSAQTMNEMSVSIFIPR 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03518 1329 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Viun7g03518 1329 FunFam cysteine-rich receptor-like protein kinase 10 1086 1287 - -
Viun7g03518 1329 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Viun7g03518 1329 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 972 1085 - -
Viun7g03518 1329 CDD STKc_IRAK 336 601 - -
Viun7g03518 1329 Pfam Protein tyrosine and serine/threonine kinase 1013 1280 IPR001245 GO:0004672|GO:0006468
Viun7g03518 1329 Pfam Protein tyrosine and serine/threonine kinase 334 603 IPR001245 GO:0004672|GO:0006468
Viun7g03518 1329 SUPERFAMILY Protein kinase-like (PK-like) 993 1293 IPR011009 -
Viun7g03518 1329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Viun7g03518 1329 SUPERFAMILY Protein kinase-like (PK-like) 314 618 IPR011009 -
Viun7g03518 1329 Gene3D - 707 812 IPR038408 -
Viun7g03518 1329 Gene3D - 821 929 IPR038408 -
Viun7g03518 1329 Gene3D - 141 241 IPR038408 -
Viun7g03518 1329 Gene3D - 26 129 IPR038408 -
Viun7g03518 1329 FunFam Cysteine-rich receptor-like protein kinase 10 286 405 - -
Viun7g03518 1329 ProSitePatterns Protein kinases ATP-binding region signature. 1016 1039 IPR017441 GO:0005524
Viun7g03518 1329 ProSiteProfiles Gnk2-homologous domain profile. 28 129 IPR002902 -
Viun7g03518 1329 ProSiteProfiles Protein kinase domain profile. 1010 1290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03518 1329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1131 1143 IPR008271 GO:0004672|GO:0006468
Viun7g03518 1329 ProSiteProfiles Gnk2-homologous domain profile. 708 812 IPR002902 -
Viun7g03518 1329 FunFam cysteine-rich receptor-like protein kinase 10 406 612 - -
Viun7g03518 1329 SMART serkin_6 330 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03518 1329 SMART serkin_6 1010 1280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03518 1329 FunFam Cysteine-rich receptor-like protein kinase 10 139 241 - -
Viun7g03518 1329 Pfam Salt stress response/antifungal 835 925 IPR002902 -
Viun7g03518 1329 Pfam Salt stress response/antifungal 148 238 IPR002902 -
Viun7g03518 1329 Pfam Salt stress response/antifungal 714 809 IPR002902 -
Viun7g03518 1329 Pfam Salt stress response/antifungal 34 126 IPR002902 -
Viun7g03518 1329 ProSiteProfiles Gnk2-homologous domain profile. 817 929 IPR002902 -
Viun7g03518 1329 Gene3D Phosphorylase Kinase; domain 1 972 1085 - -
Viun7g03518 1329 Gene3D Phosphorylase Kinase; domain 1 290 405 - -
Viun7g03518 1329 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 644 - -
Viun7g03518 1329 CDD STKc_IRAK 1016 1280 - -
Viun7g03518 1329 ProSiteProfiles Protein kinase domain profile. 330 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03518 1329 Gene3D Transferase(Phosphotransferase) domain 1 1086 1289 - -
Viun7g03518 1329 Gene3D Transferase(Phosphotransferase) domain 1 406 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03518 Viun-Chr7 36696791 36707560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03518 8 659 Receptor kinase-like Gene Family AT4G05200 47.865 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03518 PK_Tyr_Ser-Thr 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03518 - - var:108324781 1667.51