Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03517 ATGTGCATCTTGAAATCCTCTTCAACCCACTTGCTAATTCTCTCCTTGTTTGTGTTCCTTAACTATGCAACAGAAGCTGCACCTACATATAGCGCACATGCCTGCACAGATGGATCCTTTTACCGACCCAACACAACATTCCAAACCAACTTGAATCTCTTCCTCTCATCCCTCGTCTCTAACGCCACCCTCCACGACGGTTACTACCTCACCAACTTCTCCCTAGGAGCCCCTGGCGAGGTCAAGGGACTCTTCCTCTGCCGCGGTGACGTAACCCCCTCCGTCTGCCACGACTGTGTCGCCGCCGCGGCCGACAACATCACACGCCTCTGCACCAACCAAACAGAGTCTGTAATATGGTATGACGAGTGTATGGTGCGCTACTCCAACCTTTCCTTCCTCAACAACATAGTCCCAAGTATTGGCATCAGTTCCCAACAGAGCGTTCCTGATTCCGATATTAACAGCTTCATCGATTTTCTTGCATCCGCGCTGAATGGTGTGGCGCAGGATGCGGTGAATTCTCTTTCGGGTAGAATGTTTGCCACAAGAGAAGCGAGTTTCACGAGCTCAATGAGTCTGTACGCCCTGGCGCAGTGTAGACCTGATTTATCCGTCTTCGATTGCAACATGTGCTTAACAGGCGCCATCAGTAGCCTCGGTGAAGGAAAACGAGGTGCACGGAACCTGCTTCCTAGTTGTAATGTCAGATATGAATTGTACCCTTTTTACAATGTTTCCGCCGTCTCCACTAAACCAGAGTCTCTTTCCCCATCTTCAGGAAAAAGAAGTATCTCTATAATTCTGGCTATTGGTGTCCCAATTGTCGTTGCGGTGCTACTTCTCATTGTTGGCGTCTGCTTCCTACGCAAGAGAGCAAGCGATAAATACAATAATTCTTTTGGCCAGGATTCAATTGTGGAAGGTCTGAGCGATGCGGATTCATTGCAATTTGACTTGGCTATGATTGAAGCTGCCACGAACAGATTCTCGGATGAGAACAAAATTGGCAAAGGGGGATTTGGGGTGGTTTATAAGGGTGTCCTCCCTGACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGGGCAGTAGAGTTCAGGAATGAAGCTGCCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGACTATTGGGATTTTGCTTGGAGGGCCAGGAAAAGATTCTTGTCTACGAATATATTCCAAACAAAAGCCTTGATTACTTTCTATTCGATTCTACGAAGCAAAGAGAGTTAGATTGGTCACAACGCTACAAGATTATAGTTGGCATTGCTAGAGGAATTCTTTATTTACATGAAGATTCTCAACTTAGAATTGTACACCGTGATCTCAAAGCTAGCAATGTTTTATTAGATCAAAATATGAACCCAAAGATTTCTGATTTTGGCATGGCAAAGATTTTCCAGGCAGACCAGACTCAAGTAAATACAGGAAGAATAGTTGGGACTTATGGTTACATGTCCCCAGAATATGCAATGCGTGGTCAGTTTTCTATGAAATCGGATGTGTTCAGCTTTGGTGTCTTGGTTTTGGAGATTGTGAGTGGCAAGAAGAATACTGATTTTTATCAGTCAAATCACGCTGATGACCTCTTAATCTTTGCTTGGAAGAAATGGACAGAGCAAACACCAATGGAGTTTGTGGATCCAACTCTGAGAGGTTCTTGTTCGAGAAATGAAGTAAACAGATGCATCCAAATTGCTTTATTATGCGTTCAGGAAAATCCATCTCACCGACCATCAATGGCCACCATTGCACTTATGCTCAACAGTTATTCAGTTACCATGTCAATGCCACGACAACCAGCATCTTTCCTGCGTGGAAGAACTCCTAACAGGCTTAACCGAGGGCTTGACTCTGATCAGTCTACCACCGATCAATCTACCTCCTCTTCAATTCCATGGTCTGTGAATGAAGTATCCGTCACTGAAGTATACCCTCGCTAA 1983 0.4528 MCILKSSSTHLLILSLFVFLNYATEAAPTYSAHACTDGSFYRPNTTFQTNLNLFLSSLVSNATLHDGYYLTNFSLGAPGEVKGLFLCRGDVTPSVCHDCVAAAADNITRLCTNQTESVIWYDECMVRYSNLSFLNNIVPSIGISSQQSVPDSDINSFIDFLASALNGVAQDAVNSLSGRMFATREASFTSSMSLYALAQCRPDLSVFDCNMCLTGAISSLGEGKRGARNLLPSCNVRYELYPFYNVSAVSTKPESLSPSSGKRSISIILAIGVPIVVAVLLLIVGVCFLRKRASDKYNNSFGQDSIVEGLSDADSLQFDLAMIEAATNRFSDENKIGKGGFGVVYKGVLPDGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDYFLFDSTKQRELDWSQRYKIIVGIARGILYLHEDSQLRIVHRDLKASNVLLDQNMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSMKSDVFSFGVLVLEIVSGKKNTDFYQSNHADDLLIFAWKKWTEQTPMEFVDPTLRGSCSRNEVNRCIQIALLCVQENPSHRPSMATIALMLNSYSVTMSMPRQPASFLRGRTPNRLNRGLDSDQSTTDQSTSSSIPWSVNEVSVTEVYPR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03517 660 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Viun7g03517 660 ProSiteProfiles Gnk2-homologous domain profile. 137 243 IPR002902 -
Viun7g03517 660 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03517 660 MobiDBLite consensus disorder prediction 615 647 - -
Viun7g03517 660 MobiDBLite consensus disorder prediction 627 647 - -
Viun7g03517 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Viun7g03517 660 SUPERFAMILY Protein kinase-like (PK-like) 316 620 IPR011009 -
Viun7g03517 660 Pfam Protein tyrosine and serine/threonine kinase 333 598 IPR001245 GO:0004672|GO:0006468
Viun7g03517 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 290 405 - -
Viun7g03517 660 Gene3D Transferase(Phosphotransferase) domain 1 406 613 - -
Viun7g03517 660 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Viun7g03517 660 Pfam Salt stress response/antifungal 157 241 IPR002902 -
Viun7g03517 660 Gene3D - 27 133 IPR038408 -
Viun7g03517 660 Gene3D - 142 243 IPR038408 -
Viun7g03517 660 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Viun7g03517 660 SMART serkin_6 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03517 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 657 - -
Viun7g03517 660 CDD STKc_IRAK 336 602 - -
Viun7g03517 660 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Viun7g03517 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Viun7g03517 660 Gene3D Phosphorylase Kinase; domain 1 292 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03517 Viun-Chr7 36693207 36696393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03517 7 660 Receptor kinase-like Gene Family AT4G05200 50.000 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03517 PK_Tyr_Ser-Thr 2.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03517 - - vun:114191833 1246.88