Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03516 ATGTGCATCTTGAAATCCTCTTCAACCCACTTGCTAATTCTCTCCTTGTTTGTGTTCCTTAACTATGCAACAGAAGCTGCACCTACATATAGCGCACATGCCTGCACAGATGGATCCTTTTACCGACCCAACACAACATTCCAAACCAACTTGAATCTCTTCCTCTCATCCCTCGTCTCTAACGCCACCCTCCACGACGGTTACTACCTCACCAACTTCTCCCTAGGAGCCCCTGGCGAGGTCAAGGGACTCTTCCTCTGCCGCGGTGACGTAACCCCCTCCGTCTGCCACGACTGTGTCGCCGCCGCGGCCGACAACATCACACGCCTCTGCACCAACCAAACAGAGTCTGTAATATGGTATGACGAGTGTATGGTGCGCTACTCCAACCTTTCCTTCCTCAACAACATAGTCCCAAGTATTGGCATCAGTTCCCAACAGAGCGTTCCTGATTCCGATATTAACAGCTTCATCGATTTTCTTGCATCCGCGCTGAATGGTGTGGCGCAGGATGCGGTGAATTCTCTTTCGGGTAGAATGTTTGCCACAAGAGAAGCGAGTTTCACGAGCTCAATGAGTCTGTACGCCCTGGCGCAGTGTAGACCTGATTTATCCGTCTTCGATTGCAACATGTGCTTAACAGGCGCCATCAGTAGCCTCGGTGAAGGAAAACGAGGTGCACGGAACCTGCTTCCTAGTTGTAATGTCAGATATGAATTGTACCCTTTTTACAATGTTTCCGCCGTCTCCACTAAACCAGAGTCTCTTTCCCCATCTTCAGGAAAAAGAAGTATCTCTATAATTCTGGCTATTGGTGTCCCAATTGTCGTTGCGGTGCTACTTCTCATTGTTGGCGTCTGCTTCCTACGCAAGAGAGCAAGCGATAAATACAATAATTCTTTTGGCCAGGATTCAAGTAATCTCTCTTTCTCCATCAAACTGATATTTTCGTGTAATCTGTTTCAATTGCCTTTAATTTGGTGGCTGATGATTATTATCTTTCTTTGCTGTGTAGTTGTGGAAGGTCTGAGCGATGCGGATTCATTGCAATTTGACTTGGCTATGATTGAAGCTGCCACGAACAGATTCTCGGATGAGAACAAAATTGGCAAAGGGGGATTTGGGGTGGTTTATAAGGGTGTCCTCCCTGACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGGGCAGTAGAGTTCAGGAATGAAGCTGCCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGACTATTGGGATTTTGCTTGGAGGGCCAGGAAAAGATTCTTGTCTACGAATATATTCCAAACAAAAGCCTTGATTACTTTCTATTCGATTCTACGAAGCAAAGAGAGTTAGATTGGTCACAACGCTACAAGATTATAGTTGGCATTGCTAGAGGAATTCTTTATTTACATGAAGATTCTCAACTTAGAATTGTACACCGTGATCTCAAAGCTAGCAATGTTTTATTAGATCAAAATATGAACCCAAAGATTTCTGATTTTGGCATGGCAAAGATTTTCCAGGCAGACCAGACTCAAGTAAATACAGGAAGAATAGTTGGGACTTATGGTTACATGTCCCCAGAATATGCAATGCGTGGTCAGTTTTCTATGAAATCGGATGTGTTCAGCTTTGGTGTCTTGGTTTTGGAGATTGTGAGTGGCAAGAAGAATACTGATTTTTATCAGTCAAATCACGCTGATGACCTCTTAATCTTTGCTTGGAAGAAATGGACAGAGCAAACACCAATGGAGTTTGTGGATCCAACTCTGAGAGGTTCTTGTTCGAGAAATGAAGTAAACAGATGCATCCAAATTGCTTTATTATGCGTTCAGGAAAATCCATCTCACCGACCATCAATGGCCACCATTGCACTTATGCTCAACAGTTATTCAGTTACCATGTCAATGCCACGACAACCAGCATCTTTCCTGCGTGGAAGAACTCCTAACAGGCTTAACCGAGGGCTTGACTCTGATCAGTCTACCACCGATCAATCTACCTCCTCTTCAATTCCATGGTCTGTGAATGAAGTATCCGTCACTGAAGTATACCCTCGCTAA 2082 0.4472 MCILKSSSTHLLILSLFVFLNYATEAAPTYSAHACTDGSFYRPNTTFQTNLNLFLSSLVSNATLHDGYYLTNFSLGAPGEVKGLFLCRGDVTPSVCHDCVAAAADNITRLCTNQTESVIWYDECMVRYSNLSFLNNIVPSIGISSQQSVPDSDINSFIDFLASALNGVAQDAVNSLSGRMFATREASFTSSMSLYALAQCRPDLSVFDCNMCLTGAISSLGEGKRGARNLLPSCNVRYELYPFYNVSAVSTKPESLSPSSGKRSISIILAIGVPIVVAVLLLIVGVCFLRKRASDKYNNSFGQDSSNLSFSIKLIFSCNLFQLPLIWWLMIIIFLCCVVVEGLSDADSLQFDLAMIEAATNRFSDENKIGKGGFGVVYKGVLPDGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDYFLFDSTKQRELDWSQRYKIIVGIARGILYLHEDSQLRIVHRDLKASNVLLDQNMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSMKSDVFSFGVLVLEIVSGKKNTDFYQSNHADDLLIFAWKKWTEQTPMEFVDPTLRGSCSRNEVNRCIQIALLCVQENPSHRPSMATIALMLNSYSVTMSMPRQPASFLRGRTPNRLNRGLDSDQSTTDQSTSSSIPWSVNEVSVTEVYPR 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03516 693 Gene3D Phosphorylase Kinase; domain 1 339 438 - -
Viun7g03516 693 SUPERFAMILY Protein kinase-like (PK-like) 349 653 IPR011009 -
Viun7g03516 693 ProSiteProfiles Gnk2-homologous domain profile. 137 243 IPR002902 -
Viun7g03516 693 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 690 - -
Viun7g03516 693 Pfam Protein tyrosine and serine/threonine kinase 366 631 IPR001245 GO:0004672|GO:0006468
Viun7g03516 693 CDD STKc_IRAK 369 635 - -
Viun7g03516 693 MobiDBLite consensus disorder prediction 648 680 - -
Viun7g03516 693 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Viun7g03516 693 MobiDBLite consensus disorder prediction 660 680 - -
Viun7g03516 693 Gene3D Transferase(Phosphotransferase) domain 1 439 646 - -
Viun7g03516 693 Gene3D - 27 133 IPR038408 -
Viun7g03516 693 Gene3D - 142 243 IPR038408 -
Viun7g03516 693 FunFam cysteine-rich receptor-like protein kinase 10 439 641 - -
Viun7g03516 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Viun7g03516 693 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Viun7g03516 693 Pfam Salt stress response/antifungal 157 241 IPR002902 -
Viun7g03516 693 ProSiteProfiles Protein kinase domain profile. 363 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03516 693 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Viun7g03516 693 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Viun7g03516 693 SMART serkin_6 363 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03516 693 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 338 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03516 Viun-Chr7 36693205 36696393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03516 7 693 Receptor kinase-like Gene Family AT4G05200 47.966 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03516 PK_Tyr_Ser-Thr 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03516 - - vun:114191833 1333.16