Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03515 ATGTGCATCTTGAAATCCTCTTCAACCCACTTGCTTATAATTCTCTCCCTGTTTCTGTTCCTAATCTGTGCAAGTGAAGCTGCACCGACATATACCATCCATGCCTGCACAGATGAATCCTTTTACCTACCCAACACAACATTTCAAACCAACTTGAACCTCCTTCTCTCATCCCTCGTCTCCAACGCCACCCTCCACGACGGTTTCTACCGCACCACCATCTCTCTCGGAGCCCCCGGAGAGGTCAAGGGACTCTTCCTCTGCCGCGGCGATGTCACCCCCTCCGGGTGTCACGACTGCGTCGCCGCCGCTACAAAAAAGATCACACAGTTCTGCACCAACCAGACAGAGTCCATTATCTGGTACGACGAGTGCATGCTGCGCTACTCCAACAACTCCCGCCTCAACGACGTAGTCCCTCGGTTTAACTTGTTCAATGTGCAAAGCGTCCCTGAGTCGGACCACTCACAGTTCAACAAAATTCTTGTCTCCACGTTGAATGATGCGAAACAAGAAGCCCTCAATTCGGGGAAAAATTTTGCTACAAAAGAAGCGAATGTCACGAGCTCAATGAAGCTCTACACACTGGTCCAATGCACGCCCGATTTGTCCACTTCTTTATGCACCATGTGCTTCGAAAGCGCCATCAGTGCCATTCCTAATTGCTGTGACGGCAAACAAGGTGCACAGTCTCTGCTTCCGGGTTGTAATGTTAGATATGAATTGTACCCGTTTTACAATGTTTCCTCTGTCTCCACACAACCACAGTTTTTCTCTCCATCTTCAGGGAGAAGCAGAATTTCTGTAATTGTAATTGTGGCGATTGTTGTCCCAATTGTTGTTGCGGCTGTACTTTTCATTGTTGGCGTCTGCTTCCTACGTAAGAGGGCAAGCCAAAGATACATTAATTCTTTGGGCCAGGATTCAATTGTGGATGATCTTACTGATGTGGAGTTCCTGCAATTTGACTTGGCTACAGTTGAAGCTGTCACAAACAGATTCTCGGATGAGAACAAGATTGGCCATGGCGGATTTGGGGTGGTTTATAAGGGTGTCCTCCCTAACGGACATGAGATAGCTGTGAAGAGGTTGTCAGCAACCTCCTTGCAGGGTGCAATAGAGTTCAGGAACGAAGCTTCCCTTGTAGCCAAACTTCAGCATAGAAATTTAGTGAGACTTTTAGGATTTTGCTTGGAGGGGCAGGAGAAAATCCTTATCTATGAATACATACCAAACAAAAGCCTTGATCACTTTCTATTTGACCCTGTCAAGCAAAGAGAGTTAGATTGGTCAAAACGCTACAAGATTATAGTTGGCATTGCCAGAGGAATTCTTTATTTACACGAAGATTCCCAGCTTAGAATTATACACCGCGATCTAAAAGCCAGTAATGTTTTACTGGATGAAAATATGAATCCAAAGATTTCAGATTTTGGTTTGGCAAAAATTTTTCAGGCAGATCAGACTCAAGTAAATACAGGAAGAATTGTTGGGACATTTGGCTACATGCCTCCGGAATACGCAATGCGTGGACAATTTTCGGTGAAATCAGATGTGTTCAGTTTCGGTATCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAATACTGATTTATATCAATCGAAACACGCCGATGACCTCTTAAGTCTTGCTTGGAAGCATTGGACGGAACAAACACCTATGGAGTTTGTGGATCCAACTCTGCGAGGTTCTTATTCAAGAAATGAAGTAAATAGATGCATCCATGTTGGTTTATTGTGTGTACAGGAGAGTCCATCTCACAGACCATCAATGGCCACCATTGCACTTATGCTGAACAGTTATTCAGTTACCATGTCAGTGCCCCGACAACCAGCATCTTTCCTACGTGCTAGAAGTCCTAACGGAGGGCCTGACTCTGATCAGTCCACCACCAACCAGTCTACCACCAGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACGGAATTATACCCTCGCTAA 1986 0.4512 MCILKSSSTHLLIILSLFLFLICASEAAPTYTIHACTDESFYLPNTTFQTNLNLLLSSLVSNATLHDGFYRTTISLGAPGEVKGLFLCRGDVTPSGCHDCVAAATKKITQFCTNQTESIIWYDECMLRYSNNSRLNDVVPRFNLFNVQSVPESDHSQFNKILVSTLNDAKQEALNSGKNFATKEANVTSSMKLYTLVQCTPDLSTSLCTMCFESAISAIPNCCDGKQGAQSLLPGCNVRYELYPFYNVSSVSTQPQFFSPSSGRSRISVIVIVAIVVPIVVAAVLFIVGVCFLRKRASQRYINSLGQDSIVDDLTDVEFLQFDLATVEAVTNRFSDENKIGHGGFGVVYKGVLPNGHEIAVKRLSATSLQGAIEFRNEASLVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDHFLFDPVKQRELDWSKRYKIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGLAKIFQADQTQVNTGRIVGTFGYMPPEYAMRGQFSVKSDVFSFGILVLEIVSGKKNTDLYQSKHADDLLSLAWKHWTEQTPMEFVDPTLRGSYSRNEVNRCIHVGLLCVQESPSHRPSMATIALMLNSYSVTMSVPRQPASFLRARSPNGGPDSDQSTTNQSTTSSIPWSVNEVSITELYPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03515 661 ProSiteProfiles Gnk2-homologous domain profile. 138 245 IPR002902 -
Viun7g03515 661 FunFam Cysteine-rich receptor-like protein kinase 10 295 409 - -
Viun7g03515 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Viun7g03515 661 FunFam Cysteine-rich receptor-like protein kinase 10 142 245 - -
Viun7g03515 661 FunFam cysteine-rich receptor-like protein kinase 10 410 612 - -
Viun7g03515 661 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Viun7g03515 661 SUPERFAMILY Protein kinase-like (PK-like) 319 640 IPR011009 -
Viun7g03515 661 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Viun7g03515 661 Gene3D Phosphorylase Kinase; domain 1 298 409 - -
Viun7g03515 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 134 - -
Viun7g03515 661 CDD STKc_IRAK 340 606 - -
Viun7g03515 661 Gene3D Transferase(Phosphotransferase) domain 1 410 617 - -
Viun7g03515 661 MobiDBLite consensus disorder prediction 621 647 - -
Viun7g03515 661 Pfam Protein tyrosine and serine/threonine kinase 337 602 IPR001245 GO:0004672|GO:0006468
Viun7g03515 661 Gene3D - 142 245 IPR038408 -
Viun7g03515 661 Gene3D - 28 133 IPR038408 -
Viun7g03515 661 SMART serkin_6 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03515 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 660 - -
Viun7g03515 661 MobiDBLite consensus disorder prediction 629 647 - -
Viun7g03515 661 ProSiteProfiles Protein kinase domain profile. 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03515 661 Pfam Salt stress response/antifungal 153 243 IPR002902 -
Viun7g03515 661 Pfam Salt stress response/antifungal 36 131 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03515 Viun-Chr7 36688942 36692414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03515 14 661 Receptor kinase-like Gene Family AT4G05200 48.806 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03515 PK_Tyr_Ser-Thr 8.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03515 - - gmx:100788416 967.222