Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03513 ATGGCCCGTCTTTCCTTCAAACATGCTCTCCTCTTCATATTTCTTATCTTTACCACTGTCCACGCAACAGATGTTCCTATTTTCCTTCGCCAAAATTGCACAACCAACGAAACCTTCACCTCCAACACCACTTTCCAAGTCAACCTCAGCACCCTCTTGTCTTTTCTATCCAACTCCACCCGAAACACCGAATTTCGCAACGCCACCGTATCCGGCGGAAGCCCCTCCGACACAGTTTACGGTCTCTTCCTCTGCCGCGGCGACGTGCCCCCTCAACTTTGTCAACAGTGTGTCCTGAACGCGACCCAAAGACTCAGCAATCAAAACACAGATACATGCAAGTTTGCAAAAAGCGCTATAATTTGGTACGACGAATGTTTGGTTCGATATTCCAACAGGGACTTTTTCTCCACGGTGGAGACGAGACCCAGAATGCGTCTGCGGAACACCGCCAACATTTCCGACACAAAAAGCTTCTTGCGCTTGTTGTACACCACCTTGAATGAAACCGCAGACGAGGCAGCGAATTCTTCTAACGGTGCTAAGTTATACGCCACAAAACAAGCTAAGATCTCTGGGTTTCAGACCCTCTATTGTCTGACTCAGTGCACACCGGATTTGTCACCCCAAGATTGCAGAAAGTGTCTCAGTGATGTGATAGGGGATCTTTCATGGTGTTGTCCTGGAAGCCAAGGAGGAAGAGTTTTGTATCCAAGTTGTAACTTTAGGTATGAGCTCTATCCTTTCTACAGAATGGATTCTCCGCCACCTGAAGCAAATGTTAGTCCAACAACTTCTACCATCAAAAAAGGGAGAAGCAGAATTTCTGTAATTGTAATTGTGGCGATTGTTGTCCCAATTGTTGTTGCGGCTGTACTTTTCATTGTTGGCGTCTGCTTCCTACGTAAGAGGGCAAGCCAAAGATACATTAATTCTTTGGGCCAGGATTCAATTGTGGATGATCTTACTGATGTGGAGTTCCTGCAATTTGACTTGGCTACAGTTGAAGCTGTCACAAACAGATTCTCGGATGAGAACAAGATTGGCCATGGCGGATTTGGGGTGGTTTATAAGGGTGTCCTCCCTAACGGACATGAGATAGCTGTGAAGAGGTTGTCAGCAACCTCCTTGCAGGGTGCAATAGAGTTCAGGAACGAAGCTTCCCTTGTAGCCAAACTTCAGCATAGAAATTTAGTGAGACTTTTAGGATTTTGCTTGGAGGGGCAGGAGAAAATCCTTATCTATGAATACATACCAAACAAAAGCCTTGATCACTTTCTATTTGACCCTGTCAAGCAAAGAGAGTTAGATTGGTCAAAACGCTACAAGATTATAGTTGGCATTGCCAGAGGAATTCTTTATTTACACGAAGATTCCCAGCTTAGAATTATACACCGCGATCTAAAAGCCAGTAATGTTTTACTGGATGAAAATATGAATCCAAAGATTTCAGATTTTGGTTTGGCAAAAATTTTTCAGGCAGATCAGACTCAAGTAAATACAGGAAGAATTGTTGGGACATTTGGCTACATGCCTCCGGAATACGCAATGCGTGGACAATTTTCGGTGAAATCAGATGTGTTCAGTTTCGGTATCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAATACTGATTTATATCAATCGAAACACGCCGATGACCTCTTAAGTCTTGCTTGGAAGCATTGGACGGAACAAACACCTATGGAGTTTGTGGATCCAACTCTGCGAGGTTCTTATTCAAGAAATGAAGTAAATAGATGCATCCATGTTGGTTTATTGTGTGTACAGGAGAGTCCATCTCACAGACCATCAATGGCCACCATTGCACTTATGCTGAACAGTTATTCAGTTACCATGTCAGTGCCCCGACAACCAGCATCTTTCCTACGTGCTAGAAGTCCTAACGGAGGGCCTGACTCTGATCAGTCCACCACCAACCAGTCTACCACCAGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACGGAATTATACCCTCGCTAA 2010 0.4428 MARLSFKHALLFIFLIFTTVHATDVPIFLRQNCTTNETFTSNTTFQVNLSTLLSFLSNSTRNTEFRNATVSGGSPSDTVYGLFLCRGDVPPQLCQQCVLNATQRLSNQNTDTCKFAKSAIIWYDECLVRYSNRDFFSTVETRPRMRLRNTANISDTKSFLRLLYTTLNETADEAANSSNGAKLYATKQAKISGFQTLYCLTQCTPDLSPQDCRKCLSDVIGDLSWCCPGSQGGRVLYPSCNFRYELYPFYRMDSPPPEANVSPTTSTIKKGRSRISVIVIVAIVVPIVVAAVLFIVGVCFLRKRASQRYINSLGQDSIVDDLTDVEFLQFDLATVEAVTNRFSDENKIGHGGFGVVYKGVLPNGHEIAVKRLSATSLQGAIEFRNEASLVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDHFLFDPVKQRELDWSKRYKIIVGIARGILYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGLAKIFQADQTQVNTGRIVGTFGYMPPEYAMRGQFSVKSDVFSFGILVLEIVSGKKNTDLYQSKHADDLLSLAWKHWTEQTPMEFVDPTLRGSYSRNEVNRCIHVGLLCVQESPSHRPSMATIALMLNSYSVTMSVPRQPASFLRARSPNGGPDSDQSTTNQSTTSSIPWSVNEVSITELYPR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03513 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Viun7g03513 669 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03513 669 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Viun7g03513 669 CDD STKc_IRAK 348 614 - -
Viun7g03513 669 Gene3D - 26 135 IPR038408 -
Viun7g03513 669 Gene3D - 143 249 IPR038408 -
Viun7g03513 669 MobiDBLite consensus disorder prediction 629 655 - -
Viun7g03513 669 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Viun7g03513 669 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 26 134 - -
Viun7g03513 669 MobiDBLite consensus disorder prediction 637 655 - -
Viun7g03513 669 FunFam Cysteine-rich receptor-like protein kinase 25 143 249 - -
Viun7g03513 669 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Viun7g03513 669 Gene3D Phosphorylase Kinase; domain 1 306 417 - -
Viun7g03513 669 SUPERFAMILY Protein kinase-like (PK-like) 327 648 IPR011009 -
Viun7g03513 669 FunFam Cysteine-rich receptor-like protein kinase 10 303 417 - -
Viun7g03513 669 Pfam Protein tyrosine and serine/threonine kinase 345 610 IPR001245 GO:0004672|GO:0006468
Viun7g03513 669 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 668 - -
Viun7g03513 669 SMART serkin_6 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03513 669 FunFam cysteine-rich receptor-like protein kinase 10 418 620 - -
Viun7g03513 669 ProSiteProfiles Gnk2-homologous domain profile. 141 249 IPR002902 -
Viun7g03513 669 Pfam Salt stress response/antifungal 33 132 IPR002902 -
Viun7g03513 669 Pfam Salt stress response/antifungal 152 247 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03513 Viun-Chr7 36681883 36692414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03513 11 669 Receptor kinase-like Gene Family AT4G05200 49.331 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03513 PK_Tyr_Ser-Thr 8.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03513 - - gsj:114402115 820.461