Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03509 ATGGCTTCCTTTAACCTTGTCCACTTCTTTACCTTTCTCAGCTTCATCATCAATTTCGTACCCACTGAAGCACAGTTCGACCGTAGTATCTTTGGCCCCAGTTGCCAATATTTCAACAGAACCACTCCAAAGAGCGCCTTAGCATTAAACCTGAGGGCCATTCTTTCTGATCTATCTTCCAATGCTACCGCTAAAAACAAACCATTCTACAACACAACAGTGGCCACCAAAAACCACCCCGAAAGTACTGTCTACGGAATGTTCTTCTGCTGGGGTGATGTCCCCCCTGAGCATTGTAGCCAGTGTGTGGCAAGCGCAACAAAAGCAGTGTTCTCAGATCCAGATCAAGAATTATTTTGTTCCCTAGCCCCATATGCATATATTACCTACAGAGACTGCATGATTCGCTATTCCAACATTTCCTTTTTCTCCACCCCTGACTTAACTTCGGGCTCCTCTTCATGCTTCTCTGTCGATGTCTCCAACAAGACAAACTTGATAAGTTTGTATTCCAAAACCATTAACCAAGTGGTCGAAAAGGCATCAAATTCTGGTGTTGGTGAGAAGAAGTATGCCACAAAGGAAGCAAGGATAGCTGGATTTAAGACCCTTTACTGTCAAGCTCAATGCACACCTGATCTATCACCCCAAGATTGCAGAAAATGTCTAAATTTTAGCGTAGCGGAAACTCGACGGACATGTCTATCAGACTTACCGTTGTGGGATCGTAATCCCAGCTGTAGCATGAGGTGCGATGTCTATCCTTTCTATCGCCCCAGTACCTCTCCCCCACCTTCGGGATTCCTTCCGGTTACACATTCTTCCAACACAGATTCACAAGCTCCTGCTTACCTTTCCCAAAAGTGTTCCAGGAACCAAACCAATATCACCGGTGACACAACTTTCCGGTCAAATCTCAACACCCTCTTCACTTCTTTGTCTTCCCAGTCCACCACCAACTCCGGTTTCTTCAATGACACGGTGGACACGATCAGTGGCTTCTTCATGTGCTTCGCTGACCTTTCCCCTACCCTCTGTGAGCTATGTATCCAAAATGCAACCCAAACAATATCCTCAGAATGCCCCTCCTCCAGAGAAGCTGCCATTTGGTACAATCACTGTATGCTTCACTATTCCGATCACCCGTTTCTCCCCACACTGGACACAACCCCTGCTTATCGCCACTTCAATATCGTCGATACTTTCAAACCCAACCCGCAGCAAAGCTTCTTCACATGGACTTTGGCAGAATCTGTATCTCAACTGCGATTGGATATTGCCGCAGAGCGCACTAACACTAAAAATTATGGAATTAAACAAGAAAAACTGAATGATAAACAAACCCTCCATACTCTTGCTCAATGTAGGCCAGATCTATCTCCTTCGGATTGCAGCACCTGCCTAGATAACATTATGAGAAACGAAATCCCATGGTGTTGTTTAGCAAGTCCAGAGGGAAAAGTACTGTATCCAAGCTGCTATATTATGTTTGGCTTGTCCCCATTTCACACTGAAGCTTCTCAAGTTGAGCCGCGCAAGCCAGATACTTCTTCTCCTGCCACAGAAAGTGACAATGGGTCAAAAACAATTATCTTAGTTGTTGTCCCCGTGGGTGTCTCTGCCATACTCCTTTCCCTCTGCTACTATTTGCTAAGGAGAAATACAAGGAAAATTAATTACAACACTCTTCTCAGAGAAAATTTTGGTCAGGAAAGTATCACTTTGGAGGGATTGCAATTCGATTTGACTACAATTAAAGCAGCAACAAATAATTTTTCGCCTATGCAGAAGATTGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTTGTTGATGGACGTCATATAGCTGTAAAAAGACTTTCAACAAGATCTAAACAAGGTTCAGTCGAGTTTAAGAATGAAGTGTTATTAATAGCCAATCTTCAACACAGGAATCTTGTATCATTGATTGGCTTTTGTCTGGAAGAAGAAGAAAAAATTCTTATATATGAATACATGTCAAATGGAAGTCTTGATTACCTTTTATTTGGTACTCAGCAACAAAAGTTAGACTGGCCTAAACGATATAATATCATACAAGGGACAGCTTTAGGAATTCTTTATCTACATGAATATTCTCGACGCAAAGTTATACATCGTGATCTTAAACCTAGTAATGTTTTACTGGATGAAAATATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGAATTGTTGAAATTGATCAAGATGGTGGGAATACACATAAAATAGCTGGAACATATGGTTATATTTCACCAGAATATGCTATGTTTGGACAATTTTCTGAGAAGTCGGATACTTTTAGTTTTGGTATTATGATTCTTGAGATTATCACTGGAAAAAAGAATATAAAGTTTTATGAATCTTATGATGATGGAAAAGGCATCATTGGTTATGTTTGGAAACAATGGAAAAATCATGAACCGTTAAGCATCTTGGACTCATACATTAAAGAAAGTTATTCAGCAGAGGAAGTTCTTAAATGCATTCATATTAGTCTATTATGCGTTCAAGAAAATCCAAATGAGAGACCTTCAATGGCAACAATTATTTCATATCTTAACAATCACTCACTTGATTTGCCATCTCCAGACGAACCAACATTTTTCTTTCACAGATGCGGAATGGATTCGGAGATAGTTATACAAAATCAATCCAAATCCAATCCAGCTGCTGGCAACTCAGAATCTGTTAACGACATGTCCATGAGTATTTTTCATCCACGTTAG 2757 0.4059 MASFNLVHFFTFLSFIINFVPTEAQFDRSIFGPSCQYFNRTTPKSALALNLRAILSDLSSNATAKNKPFYNTTVATKNHPESTVYGMFFCWGDVPPEHCSQCVASATKAVFSDPDQELFCSLAPYAYITYRDCMIRYSNISFFSTPDLTSGSSSCFSVDVSNKTNLISLYSKTINQVVEKASNSGVGEKKYATKEARIAGFKTLYCQAQCTPDLSPQDCRKCLNFSVAETRRTCLSDLPLWDRNPSCSMRCDVYPFYRPSTSPPPSGFLPVTHSSNTDSQAPAYLSQKCSRNQTNITGDTTFRSNLNTLFTSLSSQSTTNSGFFNDTVDTISGFFMCFADLSPTLCELCIQNATQTISSECPSSREAAIWYNHCMLHYSDHPFLPTLDTTPAYRHFNIVDTFKPNPQQSFFTWTLAESVSQLRLDIAAERTNTKNYGIKQEKLNDKQTLHTLAQCRPDLSPSDCSTCLDNIMRNEIPWCCLASPEGKVLYPSCYIMFGLSPFHTEASQVEPRKPDTSSPATESDNGSKTIILVVVPVGVSAILLSLCYYLLRRNTRKINYNTLLRENFGQESITLEGLQFDLTTIKAATNNFSPMQKIGKGGFGEVYKGILVDGRHIAVKRLSTRSKQGSVEFKNEVLLIANLQHRNLVSLIGFCLEEEEKILIYEYMSNGSLDYLLFGTQQQKLDWPKRYNIIQGTALGILYLHEYSRRKVIHRDLKPSNVLLDENMNPKISDFGMARIVEIDQDGGNTHKIAGTYGYISPEYAMFGQFSEKSDTFSFGIMILEIITGKKNIKFYESYDDGKGIIGYVWKQWKNHEPLSILDSYIKESYSAEEVLKCIHISLLCVQENPNERPSMATIISYLNNHSLDLPSPDEPTFFFHRCGMDSEIVIQNQSKSNPAAGNSESVNDMSMSIFHPR 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03509 918 SUPERFAMILY Protein kinase-like (PK-like) 576 889 IPR011009 -
Viun7g03509 918 FunFam cysteine-rich receptor-like protein kinase 10 668 870 - -
Viun7g03509 918 SMART serkin_6 592 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03509 918 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 552 667 - -
Viun7g03509 918 ProSiteProfiles Protein kinase domain profile. 592 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03509 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Viun7g03509 918 Pfam Protein tyrosine and serine/threonine kinase 595 863 IPR001245 GO:0004672|GO:0006468
Viun7g03509 918 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 284 914 - -
Viun7g03509 918 MobiDBLite consensus disorder prediction 896 911 - -
Viun7g03509 918 Gene3D Transferase(Phosphotransferase) domain 1 668 870 - -
Viun7g03509 918 CDD STKc_IRAK 598 865 - -
Viun7g03509 918 Gene3D - 150 256 IPR038408 -
Viun7g03509 918 Gene3D - 400 502 IPR038408 -
Viun7g03509 918 Gene3D - 31 142 IPR038408 -
Viun7g03509 918 Gene3D - 282 383 IPR038408 -
Viun7g03509 918 ProSiteProfiles Gnk2-homologous domain profile. 284 383 IPR002902 -
Viun7g03509 918 ProSitePatterns Protein kinases ATP-binding region signature. 598 620 IPR017441 GO:0005524
Viun7g03509 918 MobiDBLite consensus disorder prediction 896 918 - -
Viun7g03509 918 Gene3D Phosphorylase Kinase; domain 1 554 667 - -
Viun7g03509 918 Pfam Salt stress response/antifungal 166 251 IPR002902 -
Viun7g03509 918 Pfam Salt stress response/antifungal 289 380 IPR002902 -
Viun7g03509 918 Pfam Salt stress response/antifungal 407 497 IPR002902 -
Viun7g03509 918 Pfam Salt stress response/antifungal 39 139 IPR002902 -
Viun7g03509 918 ProSiteProfiles Gnk2-homologous domain profile. 29 142 IPR002902 -
Viun7g03509 918 ProSiteProfiles Gnk2-homologous domain profile. 392 502 IPR002902 -
Viun7g03509 918 ProSiteProfiles Gnk2-homologous domain profile. 148 256 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03509 Viun-Chr7 36628355 36633152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03509 277 918 Receptor kinase-like Gene Family AT4G05200 41.168 2.34e-167 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun7g03509 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03509 - - gmx:100785282 1122.46