Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03486 ATGTATCACAACAACAACATCAACCCTTGGAATTCTCAACAACAACAACAACGGTCTATATTGGAAAAGCCTCCACAAAGGACATCCTTGGAAAATGATTTGGAAAGGAACAAAGATTGTGAATCTTCCAGTAATCAAATGAAAGTTCCTCGTTCCATTGATCAAGATCCCGACAAACAATCCGGAAAGAAGCGTTACCATCGACACACGAATGAACAGATAATGGAGATGGAATGTTTCTTTAAGGAGTGTCCTCATCCAGATGACAAACAAAGGAGAGAGCTCAGCAGAGAGCTGCGGTTGAATCCCTTGCAGGTCAAGTTCTGGTTCCAAAACAAGCGTACCCAAATTAAGTCTCAACATGAACGCCACGAGAACAATCTTTTAAAGGCTGAGAATGACAAGCTTCGTGAAGAGAACACCAGGTACAAGGAGGCACTGAATAATGCTTCTTGCCCTAGTTGTGGAGGCCTCGGTGGAGAAATGTCCTTTGACGAGCAACCGCTGCGGGTTGAGAATATGCGGTTGAGAGAAGAGATTGAAAAGATGTCAGCAATGGTACCCAGATTTGCGGTAAAACCTGGGAGTTTCTACCATAACATGTCATCTCAAAACCAGATGATGCCTCCTCGGTCCCTTGATCAGGGTGTTGGAAACTATGGAGCACAGACAATTTTGATTGGGGAAATGTTTGGTGGCAATGATGAACCCCATGGGACACTCCCAATTGCTAATGATTTTGAGAAAGACATTGTTATGGAGATTGGTAATGTAGCAATGAAGGAATTCACAAACCTTGCTGAGGCTGGAAACACTTTGTGGCTCCCTGGAACCTGTGGTTGTGAGATTCTGAACCAGGATGAATATCTGAGGTCTTTCCCTAAGGGAATAGGTCCAACACCCTTAGACATAAAAATCGAAGCTTCAAGGCATTCTGCAGTGGTCATCATGGACTACAACAAACTCGTTGAGATCTTTATGGATGTGAATCAATGGGCAAACATGTTTTGCGGTATCATTTCAAGGGCAGCGATACATCAAGTTCTGGAAGTTGGCCAAACAGAAATCTTCGACGGAGCCTGTCAAGTGATGTCAGCTGAGTTCCAAGTCCCTTCACCGTTTGTTCCTGTTCGTGACGACTACTTTGTGAGGTTCTGTAAGAGAAAAAATTTAGAATCATGGACTATTGTTGATTTTTCCGTGGATCAGCTGCGACCTGATTCATTCACAAAAAGCCGAAGACGACCCTCTGGTTGCCTAATCACAGAATTGCCAAATGGTTACTCAAAGATTGTTTGGATTGAACATGTAGAACTGGAAGATAATGAAGTAGTGCATGATCTTTACAAAAGCTATGTTAATTCTGGCCTCGCCTTTGGAGCTAAACGCTGGGTGGCATCCTTGGATAGACAATGCGAGCGTCTTGCAAGTTCAATGGCCACGAACATACCCCATAAGAGCATTGGTGTGCTAATGAATTTTGGGGGACGAAGAAGTATGATGAGGCTGGCCGAAAGAATGATGTTGAGCTTTTGTACTGCTGTTGGTGCATCTACTGCAAATGTTTGGACATTGTTAACAGTGGCCAGTGAAGATGTAAGGGTCATGAGTAGAAAAAGTGTGGATGATCCAGGCAGACCTTCCGGTATTGTGCTCAGTGCTTCAACTTCTTCGTGGCTCCCCATTCCTTCAAGGACTGTTTTTGATTTTCTGCGATCTGAAAACTCAAGAAATCAGTGGGACATTCTCTCTAAAGGAGGACAAGTGGAAGAATTGGCACACATTGCCAATGGCCATGACACTGGAAACTATGTCTCCTTGCTTCGAGTCAACATTCCGAATTGCGGCCAAAGCAATATGACTATGCTTCAAGAGACTTGCACTGATGCCACAGGGTCGTATGTTGTGTATGCTCCTATTGATTTAATTTCCATGAATGCTGTGTTGAGAGGTGGAAATCCTGATTGTGTTGCCCTGCTACCCTCGGGCTTTGCTGTTCTTCCTGATGGGCCTGAACCTATGAACAACGGAGGACCCATTCGTGAGGTTGGATCTGGAGGTTGCCTTCTAACGGTGGCATTTCAGATATTGGTTGATTCTGTCCCAACTGCAAAAATCTCGGCTACTTCAGTCACCACTGTTAGCAGTTTAATCAAGTGCATAGTTGAGCGGATCCAAGCCGCACTGTGCAGTGGCGGCACTTAA 2205 0.4449 MYHNNNINPWNSQQQQQRSILEKPPQRTSLENDLERNKDCESSSNQMKVPRSIDQDPDKQSGKKRYHRHTNEQIMEMECFFKECPHPDDKQRRELSRELRLNPLQVKFWFQNKRTQIKSQHERHENNLLKAENDKLREENTRYKEALNNASCPSCGGLGGEMSFDEQPLRVENMRLREEIEKMSAMVPRFAVKPGSFYHNMSSQNQMMPPRSLDQGVGNYGAQTILIGEMFGGNDEPHGTLPIANDFEKDIVMEIGNVAMKEFTNLAEAGNTLWLPGTCGCEILNQDEYLRSFPKGIGPTPLDIKIEASRHSAVVIMDYNKLVEIFMDVNQWANMFCGIISRAAIHQVLEVGQTEIFDGACQVMSAEFQVPSPFVPVRDDYFVRFCKRKNLESWTIVDFSVDQLRPDSFTKSRRRPSGCLITELPNGYSKIVWIEHVELEDNEVVHDLYKSYVNSGLAFGAKRWVASLDRQCERLASSMATNIPHKSIGVLMNFGGRRSMMRLAERMMLSFCTAVGASTANVWTLLTVASEDVRVMSRKSVDDPGRPSGIVLSASTSSWLPIPSRTVFDFLRSENSRNQWDILSKGGQVEELAHIANGHDTGNYVSLLRVNIPNCGQSNMTMLQETCTDATGSYVVYAPIDLISMNAVLRGGNPDCVALLPSGFAVLPDGPEPMNNGGPIREVGSGGCLLTVAFQILVDSVPTAKISATSVTTVSSLIKCIVERIQAALCSGGT 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03486 734 Gene3D - 48 136 - -
Viun7g03486 734 MobiDBLite consensus disorder prediction 52 67 - -
Viun7g03486 734 CDD homeodomain 63 121 IPR001356 GO:0003677
Viun7g03486 734 SUPERFAMILY Bet v1-like 497 726 - -
Viun7g03486 734 SMART START_1 254 474 IPR002913 GO:0008289
Viun7g03486 734 Gene3D - 307 480 IPR023393 -
Viun7g03486 734 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Viun7g03486 734 MobiDBLite consensus disorder prediction 1 26 - -
Viun7g03486 734 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 59 729 IPR042160 -
Viun7g03486 734 SMART HOX_1 62 124 IPR001356 GO:0003677
Viun7g03486 734 SUPERFAMILY Bet v1-like 246 476 - -
Viun7g03486 734 ProSiteProfiles START domain profile. 245 477 IPR002913 GO:0008289
Viun7g03486 734 CDD START_ArGLABRA2_like 249 473 - -
Viun7g03486 734 Pfam Homeodomain 63 118 IPR001356 GO:0003677
Viun7g03486 734 SUPERFAMILY Homeodomain-like 56 126 IPR009057 -
Viun7g03486 734 MobiDBLite consensus disorder prediction 28 42 - -
Viun7g03486 734 MobiDBLite consensus disorder prediction 1 67 - -
Viun7g03486 734 FunFam Homeobox-leucine zipper protein HDG1 51 136 - -
Viun7g03486 734 Pfam START domain 259 474 IPR002913 GO:0008289
Viun7g03486 734 Coils Coil 114 149 - -
Viun7g03486 734 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03486 Viun-Chr7 36510341 36515694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03486 55 734 Homeobox Transcription Factor Family AT4G21750 59.775 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Viun7g03486 START 7.4e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03486 K09338 - gmx:100793758 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03486 7 36510341 36515694 Viun7g03486 7 36510341 36515694 ECH
Viun7g03486 7 36510341 36515694 Viun2g02892 2 33313681 33321151 ECH
Viun2g02892 2 33313681 33321151 Viun7g03486 7 36510341 36515694 PCT