Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03481 ATGCAAGACTTTTTGGGTTCTATTCGCCGCTCCCTGGTTTTCCGACCCGGGGGCGACGATGCTCCCTTTGCCGGAATCGCCGACAAGCTTGGCTCCGTTATTCGAAAATCGCGAATCGCATTCAAACCTCCTCCTCCTCCCATCCGGTGGCGCAAGGGCGAGTTGATTGGTTCCGGCGCCTTCGGTCACGTCTACATGGGAATGAACCTCGATTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATAGCGCCTGGTAGCGCTTATAAGGAGAACACACAGGCTAATATTCGGGAGCTCGAAGAAGAAGTTAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACTGCGAGAGAGGAGAACTCCGTAAATATTCTGCTGGAGTTCGTACCTGGTGGTTCTATCTCATCACTTTTGGGGAAATTTGGATCCTTCCCCGAATCCGTTATAAGAATGTATACGAAACAGCTTTTACTGGGCCTTGAATACCTTCACAATAATGGGATTATTCACAGAGATATTAAGGGAGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTTGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACTATTAATGGTGCAAAATCAATGAAGGGCACGCCACATTGGATGTCCCCTGAAGTTATTCTACAAACAGGACATACAATCTCCACTGATATATGGAGTGTTGCATGCACCGTGATAGAGATGGCCACAGGGAAGCCTCCATGGAGTCAACAGTATCCCCAAGAGGTTTCAGCTATTTTCTATATCGGGACAACTAAATCTCATCCACCCATACCTGAACATCTGTCTGCTGAGGCCGAAGACTTTTTGCTGAAATGTTTCCACAAGGAGCCAGATTTAAGGCCTTCTGCATCAGAGTTGTTACAGCATCCGTTCATCACCTCTGAATATCATGGATCTCATTCAATCTTACGCAGTTCAATCAGGGATTCTTGCAATAAGATGGCAACATATGGAATGAACTCTAGAACCTTCTTGGATTCTGTCCAGGGATCAACTTGCACTGGCTTGAAGGATGTTTGTCAGATAGATAGCATAAAGTTCTCAACTGTGTATCATAAAGCAGATTCCTACCAGAGAGCAGACAACAATGATGATGACATGTGTCTGATAGATGAAGATGATTTTTTGATTGGTTCACCAGTAAAATCTGAATCTCTATTAGCTTCTGATGATACGAAGAGTTGCAATCCTTCGAGCAAACCTGCGGATGATCATCTTTGCAATTTTAATGAAACCCAATATTTAGAGAAAAACAGACCATACTTGTCATTTTCAAGTGAGCCTCTAGGAACTGAAGATGATGAAGAAGTTACTGAATGTAAAATTAGAGACTTCCTTGATACTAAGGCCCTTGAACTGAAGAAGCTTCAAACACCTCTTTATGAAGAATTCTTTAGCATATCAAATGCAGCCGTTGCTCCTACTTCCTTTGCAAAGAGTAAAGTTATATCGGGTGTCCCAAATGTAACATCAAAACTCAGATCGCCTAGTCAGGCTTGGAGACGGTTCTCAATGGTTGGCAGTGCTACCGTAGCAAGCCCTGGAAGTCATACCAAATACCGATCGAAGCATAATGGTGCTCACTGTCAACCTTTGCAGGAAATTCAGCCATCTGAGCTTAATGAATTAAAGGAGACTCTTCATGACGCTGAGCTGGAATCATCTAGTGCAAGCTCAAACTTCTCGGAGAGACAAAGGAAATGGAAAGAAGAATTGGCTGAAGAGCTAGAGTGGAAACGAGAGATGATGCGTCGGGCCGGAACTGGAGGAAAAATTACATCTCCAAAGGATCGCTGA 1860 0.4366 MQDFLGSIRRSLVFRPGGDDAPFAGIADKLGSVIRKSRIAFKPPPPPIRWRKGELIGSGAFGHVYMGMNLDSGELIAIKQVLIAPGSAYKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREENSVNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSAIFYIGTTKSHPPIPEHLSAEAEDFLLKCFHKEPDLRPSASELLQHPFITSEYHGSHSILRSSIRDSCNKMATYGMNSRTFLDSVQGSTCTGLKDVCQIDSIKFSTVYHKADSYQRADNNDDDMCLIDEDDFLIGSPVKSESLLASDDTKSCNPSSKPADDHLCNFNETQYLEKNRPYLSFSSEPLGTEDDEEVTECKIRDFLDTKALELKKLQTPLYEEFFSISNAAVAPTSFAKSKVISGVPNVTSKLRSPSQAWRRFSMVGSATVASPGSHTKYRSKHNGAHCQPLQEIQPSELNELKETLHDAELESSSASSNFSERQRKWKEELAEELEWKREMMRRAGTGGKITSPKDR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03481 619 Pfam Protein kinase domain 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03481 619 Coils Coil 561 581 - -
Viun7g03481 619 Gene3D Transferase(Phosphotransferase) domain 1 49 344 - -
Viun7g03481 619 ProSiteProfiles Protein kinase domain profile. 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03481 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Viun7g03481 619 Coils Coil 90 110 - -
Viun7g03481 619 FunFam Serine/threonine-protein kinase STE11 47 140 - -
Viun7g03481 619 FunFam Mitogen-activated protein kinase kinase kinase 2 49 341 - -
Viun7g03481 619 SUPERFAMILY Protein kinase-like (PK-like) 49 314 IPR011009 -
Viun7g03481 619 SMART serkin_6 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03481 619 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 326 - -
Viun7g03481 619 CDD STKc_MAPKKK 49 313 - -
Viun7g03481 619 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03481 Viun-Chr7 36474138 36482911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03481 1 612 MAP Kinase Kinase Kinase AT3G06030 54.421 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Viun7g03481 Pkinase 4.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03481 - K20606 gmx:100795863 1062.75