Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03448 ATGAATGGTGCTGCATGTGTTGAGGCAGAGGGCTTTGAGTTTGCTGAAGTTGATCCTACAGGAAGATATGGAAGATACAATGAAATTCTTGGCAAAGGAGCTTCCAAGACAGTCTATAGAGCATTTGATGAGTATGACGGGATAGAAGTGGCATGGAATCAAGTAAAGCTTTATGACTTTTTGCAGAATCCTGAAGATCTTGAGAGGTTATACAGTGAAATCCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTATACTTCGTGGGTTGATACTGCCAACAGACAAATCAATTTTGTCACTGAGATGTTTACCTCTGGGACTCTAAGACAGTACAGACTTAAGCACAGACGAGTTAACATCAGAGCTGTTAAGCATTGGTGTAGGCAGATTTTGGAAGGGCTTCTGTATCTGCACAGCCATAATCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATCGGAGATCTTGGCCTTGCTGCGATTCTCCGCAAATCTAATGCTGCTCGTTGTGTTGGCACACCTGAGTTTATGGCTCCGGAAGTGTATGAAGAGGATTACAATGAGTTGGTTGACATATACTCTTTTGGAATGTGCATCTTAGAGATGGTCACTTTTGAATATCCTTATAGTGAATGCAACCACCCTGCTCAAATTTACAAGAAAGTTGTATCTGGGAAGAAGCCAGAAGCTCTTTACAAAGTAGTCAACCCAGAGGTAAGACAGTTTGTAGAGAAATGCTTAGCAACTGCGTCCCTCAGACTTTCAGCGAAGGAACTCTTGGAGGATCCTTTTCTACAAATTGATGATTATGGATTTGACTCAAAAGTAGTGCAGTATCAAAGAGATTGCTATGAAGTAGCCCCATTAATCAGACAGCCTTTGAATGGAGCGTATGGCATCAACACCTCAATGAGTAGGTACACTGATAATCTTGGTGGTTATGGATCCTTCTCTGAATTGGATTATCATCAAAACGATTTCGAAACAAGGGAAATCGGTCTCTTTGATTGTGAAGAGGATAACAATTTGGTTAAGGTTGACACAACAATCAAAAGTGGGAGAAAAGAAGATGATGGCATCTTTTTGAGACTCAGAATTGCAGATAACGAAGGTCGAATTCGAAACATCTACTTCCCATTTGACATTGAGACTGATACTGCATTGAGCGTTGCAAATGAAATGGTAGCTGAGCTTGACATAACTGATCAAGATGTATCAGATTTGGCAAATATGATAGACAATGAAATTGCAACACTGGTTCCCGAGTGGAGAACAGGAGCCAGAATAGAGGAAAATTCAGAATGTTCAAGTGCAGGTGTCTGCCTCAATTGTGCTGCAAACGGTTACTTGTTTGATTATGTATCATCAAATAATCCCTGTGGCAAGAACCTTCAATTTCTTCATTGTTCTAAAAATGGATGTGCTGCAATTCATGGCCGATTTGAAGAGATAACGTATCAAGTTGAAGGATCTGCAAGTAGTGACACCGAAGGTACACGGCATGCGTCAAGCCATTCCGATGGCATTCATTTTACAGATATTTGGGCTCAGAGAGATGAACCAGAGTTATGCAATGAAGAGTTAAAAGACATACACTGTGACCAAACTCATGAGGTATCAAACCCGTTGAACATCAAGGAGGAAGGAAAAGCTGTTAATGTAGATGAAGAAAGTGATCTCAATACCAAAAGGCCTCATTCAAACCCTGCAGTAAGTTGTGTTATGTCGGATTGTGAAAATGAAATTAGGCAAGAGCTAAGATGGCTCAAAGCAAAGTACCAGATTCAGTTAAGGGAGCTTAAAGATCAACAACTGGGGGTTAAGCCAAAACTTACTTGCATCATTTCTCCTGATACGAAAAAATTAAATTGTGGGAAAAATGGAATTCAGAGTTTATCAGCTCAATACAAATTGAAGATACAAAAGAATAAACCACAATTAAGATCTATAGTTTCTGGGAAGCATTTTCCTGTTGAAGACGAGAAATTCAACGATTATGCTGATCAAATGGTTCAAAATGTTGATGAGATTAATCAGTCTAACAGTCCTGAGCGAATGGTCACAGCCAAGGATTTCTTCACAGGAGCTTTGTTTCCAAGCTCACTTCAGAGGGCAACCTCGCTTCCTGTTGATGCAATAGAATTCTAG 2196 0.4003 MNGAACVEAEGFEFAEVDPTGRYGRYNEILGKGASKTVYRAFDEYDGIEVAWNQVKLYDFLQNPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANRQINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSHNPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKKPEALYKVVNPEVRQFVEKCLATASLRLSAKELLEDPFLQIDDYGFDSKVVQYQRDCYEVAPLIRQPLNGAYGINTSMSRYTDNLGGYGSFSELDYHQNDFETREIGLFDCEEDNNLVKVDTTIKSGRKEDDGIFLRLRIADNEGRIRNIYFPFDIETDTALSVANEMVAELDITDQDVSDLANMIDNEIATLVPEWRTGARIEENSECSSAGVCLNCAANGYLFDYVSSNNPCGKNLQFLHCSKNGCAAIHGRFEEITYQVEGSASSDTEGTRHASSHSDGIHFTDIWAQRDEPELCNEELKDIHCDQTHEVSNPLNIKEEGKAVNVDEESDLNTKRPHSNPAVSCVMSDCENEIRQELRWLKAKYQIQLRELKDQQLGVKPKLTCIISPDTKKLNCGKNGIQSLSAQYKLKIQKNKPQLRSIVSGKHFPVEDEKFNDYADQMVQNVDEINQSNSPERMVTAKDFFTGALFPSSLQRATSLPVDAIEF 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03448 731 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03448 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Viun7g03448 731 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 625 - -
Viun7g03448 731 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Viun7g03448 731 Gene3D - 355 441 - -
Viun7g03448 731 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Viun7g03448 731 FunFam probable serine/threonine-protein kinase WNK9 374 458 - -
Viun7g03448 731 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03448 731 CDD STKc_WNK 22 281 - -
Viun7g03448 731 FunFam Probable serine/threonine-protein kinase WNK1 8 105 - -
Viun7g03448 731 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Viun7g03448 731 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 432 IPR024678 GO:0004674|GO:0005524
Viun7g03448 731 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Viun7g03448 731 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03448 731 Coils Coil 599 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03448 Viun-Chr7 36118718 36122347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03448 1 513 MAP Kinase Kinase Kinase AT3G22420 57.350 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun7g03448 Pkinase 5.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03448 K08867 - gmx:100804179 1243.02