Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03427 ATGCCTACCCTGTTCTCCAAACGCCTTCACCTCTGTTTCTTCAAGCTCAAATACCCCACCATTCTCCACCACCCTCACCCTCCACCTTCCACCGACAATTCCACCACCTTCACCCACCCCTCTTCTTCTTCCGACGACGATGACGACCGTTCCTCCTCCACGGAGCCCGACTTCGCCTCCGTCTTCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCGGGCACTTCCAACTCCATCGTCGAATCCCCGGACACCCGCACCTTCGTCCCCACCGGCGGCGGCGTCACAGTCCCCAAGTATTCCCTCAACCCCTACGTGGATTTCCTCCGCTCAATGCACGAAATGATCCGTTCACGACAAGTCTTAGACATCACCCAAGACTGGGACTACCTCCACGAACTTCTCCTGTGCTACCTCGCTCTCAACCCCTCTCACACCCACAAGTACATCATTCGCGCCTTCACCGACCTTGTCCTCCAACTCCTCTCCTCCACCCCCTGTCGGACGCACAACCAACACCACCACCGGCGCCACCGTAGCCTCTCCGGAAACTTCCTCTGA 558 0.586 MPTLFSKRLHLCFFKLKYPTILHHPHPPPSTDNSTTFTHPSSSSDDDDDRSSSTEPDFASVFASQRFFFSSPGTSNSIVESPDTRTFVPTGGGVTVPKYSLNPYVDFLRSMHEMIRSRQVLDITQDWDYLHELLLCYLALNPSHTHKYIIRAFTDLVLQLLSSTPCRTHNQHHHRRHRSLSGNFL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03427 185 ProSiteProfiles OVATE domain profile. 96 159 IPR006458 -
Viun7g03427 185 Pfam Transcriptional repressor, ovate 100 160 IPR006458 -
Viun7g03427 185 NCBIfam uncharacterized plant-specific domain TIGR01568 94 162 IPR006458 -
Viun7g03427 185 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 40 161 IPR038933 GO:0045892
Viun7g03427 185 MobiDBLite consensus disorder prediction 24 56 - -
Viun7g03427 185 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03427 Viun-Chr7 36059087 36060164 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun7g03427 Ovate 3.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03427 - - gmx:102666896 272.322