Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03408 ATGTTCTCTTCCACATATGACTCCAACCTTTTTCCAAACTTCCCTTCTTCTTCTTACCCTATCCTTCCTTTTCTCATTGATCCTGAAAATGATTTTGCAAGCAACACCCTTTTTGATGACCCTCTTCTTGTTCCCTTCACACCCATCACCCATGATCCTCCATTCCCTGAAGAGACTGTTGCCAATTTTGCAGTTGCTGACTGCACTGCCATTCTTGAACAGGATGCAAACACTAACTACGGTTCCCACAATGGTAGCATGTCCAATTTTCTGACCCAGAAACCAGCCATAGCAAAGAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGATCGCAGGGTGAGATTATCAAGCGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCAAGTAACACCCTTGAGTGGCTTTTCACAAAGTCTGAGAATGCGATCAAAGAACTAGCCCAAAGTAAGCATAGCGGCAGTATTAGTGGGGGTGACAAGTGTTCCCGCGACGCTTCTGTGGATTCAAATAACAACAAATCATTGGCGGGTAGTGGGGGTGATGGTTCCAAAGGGAGGAAGTCAAAATCGGCACAGAAGGATGATGCTTGTGTTCAGACCAAAAAGGAGTCAAGGGAAAGGGCAAGAGCAAGAGCAAGAGAAAGAACTTGCTACAAAATGTGTAGCACTAGAAGGGTGCAGCAAGACTTTGATGAAAGGTGCCCTGTAACTGCAAACACTCAAATGCTGCACCAATTCAGGTCTTCCATTCTGCCCGAACCTGAAGCTTTGGCGAGATGGGTTCAGCCATATAACCCTTTTCTCATTCATAATGAAGCACCCAGAGATGGATTTGACGTCATTGAAGAATCTATTATGATTAAAAGGAACATGAAGCCGTCAACTATGTTAGCTTCTCATCACCAAAACCAAAACCAAAACCAAAGCCAAAACCTTGTGATCCCTAGGGATGCAAGTTTCAACAACAATGTGTGCCCCTTGCTACCCTATTCCACTCCAGACTGGGACACTAATGGGGCCTTTACTGGATGCTCCAACTTTTGTGCAATAGGAACCATGAACCTATCTACATGTTTCATGAACCAGTGA 1122 0.4447 MFSSTYDSNLFPNFPSSSYPILPFLIDPENDFASNTLFDDPLLVPFTPITHDPPFPEETVANFAVADCTAILEQDANTNYGSHNGSMSNFLTQKPAIAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELAQSKHSGSISGGDKCSRDASVDSNNNKSLAGSGGDGSKGRKSKSAQKDDACVQTKKESRERARARARERTCYKMCSTRRVQQDFDERCPVTANTQMLHQFRSSILPEPEALARWVQPYNPFLIHNEAPRDGFDVIEESIMIKRNMKPSTMLASHHQNQNQNQSQNLVIPRDASFNNNVCPLLPYSTPDWDTNGAFTGCSNFCAIGTMNLSTCFMNQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03408 373 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Viun7g03408 373 MobiDBLite consensus disorder prediction 174 189 - -
Viun7g03408 373 Pfam TCP family transcription factor 98 233 IPR017887 -
Viun7g03408 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 91 320 IPR005333 GO:0003700
Viun7g03408 373 MobiDBLite consensus disorder prediction 159 223 - -
Viun7g03408 373 MobiDBLite consensus disorder prediction 197 223 - -
Viun7g03408 373 ProSiteProfiles R domain profile. 213 230 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03408 Viun-Chr7 35894334 35895955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03408 97 340 TCP Transcription Factor Family AT1G67260 35.249 9.48e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Viun7g03408 TCP 3.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03408 - - aprc:113871835 575.089