Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03398 ATGGCCTCTCATTCTCCCAAGAGAAAAAGCCCTTATCTTAATGCACCATTCCTCCTAATTCTCATCTCTTTCATCAACCCTTCACACCAAGCTCTTCCCCCTCTAAACCCAAGGCTCAACAAAGCCTACACAGCACTCCAAGCATGGAAACACAAAATCACATCAGACCCCAAAAACTTCACCTTAAACTGGTGTGGCCCCAATGTTTGCAACTACACTGGAATATACTGTGCACCTGCCCCAGATGACCCTCAAATCTACACTGTTGCTGGAGTTGACCTAAACCACGCCTCCATATCTGGTTCATTGCCAGAAGAACTTGGCCTCTTAACTGACCTAGCACTTTTCCACATAAACTCCAACCGCTTCTGTGGCTCCCTCCCCAACACCTTCGACCACCTAAACCTCCTCCACGAACTAGACATAAGCAACAACCAATTCTCGGGACCCTTCCCCGAGGTTCTTCTCTGCATCTCCTCCTTAAAATACTTAGACATCAGATTCAACAACTTCTACGGCAACATTCCCTCGCGCCTCTTCGATCTCAAACTCGATGCCCTTTTCATCAACAACAACAACTTCAAATTTTCCCTGCCGGACAACTTCGGCAACAGTCCTGTTTCTGTTCTTGTCTTTGCAAACAATGACCTCAAGGGGTGTCTCCCTTCCAGCTTGGCCAAAATGAAGGGTACCCTTAACGAGATTATCATCACCAACAGTGGCTTAACGGGCTGTTTGCCTAGTGAGATAGGGGATTTGCACAAAGTGAAGGTGTTTGATGTGAGCTTCAACAAGCTTGTTGGAGATTTGCCCCAGTCCTTGGGGAAGATGAAGAGGTTGGAGCAGTTGAATGTGGCGCATAACATGCTTTCTGGCACCATTCCTGAGAGTGTGTGCATGTTGCCGAGGTTGGAGAATTTCACGTACTCCTACAACTACTTCTGCAGTGAGTCACCGGTGTGTCTCAAGTTGAAGGATAGCGATGATACCAAGAACTGCATTCCTTATAGGCCATTGCAAAGGTCACCTGATGAGTGTGCAGCTTTCTATAAATATCCCGTTCATTGCAGTGACTTTGGTTGTGTATCTCCACCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCCTCCACCACCACCACCTCCTCCGCCGCCTCCACCGCCGGAAAAATACCACCAATATCCCTGA 1185 0.4895 MASHSPKRKSPYLNAPFLLILISFINPSHQALPPLNPRLNKAYTALQAWKHKITSDPKNFTLNWCGPNVCNYTGIYCAPAPDDPQIYTVAGVDLNHASISGSLPEELGLLTDLALFHINSNRFCGSLPNTFDHLNLLHELDISNNQFSGPFPEVLLCISSLKYLDIRFNNFYGNIPSRLFDLKLDALFINNNNFKFSLPDNFGNSPVSVLVFANNDLKGCLPSSLAKMKGTLNEIIITNSGLTGCLPSEIGDLHKVKVFDVSFNKLVGDLPQSLGKMKRLEQLNVAHNMLSGTIPESVCMLPRLENFTYSYNYFCSESPVCLKLKDSDDTKNCIPYRPLQRSPDECAAFYKYPVHCSDFGCVSPPPPPPPPPPPPPPPPPPPPPPPPEKYHQYP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03398 394 Gene3D Ribonuclease Inhibitor 40 204 IPR032675 -
Viun7g03398 394 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Viun7g03398 394 Gene3D Ribonuclease Inhibitor 205 335 IPR032675 -
Viun7g03398 394 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 29 387 - -
Viun7g03398 394 SUPERFAMILY L domain-like 42 321 - -
Viun7g03398 394 FunFam Leucine-rich repeat extensin-like protein 1 43 201 - -
Viun7g03398 394 MobiDBLite consensus disorder prediction 365 394 - -
Viun7g03398 394 FunFam Leucine-rich repeat receptor protein kinase EMS1 202 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03398 Viun-Chr7 35775656 35777186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03398 25 361 Leucine-rich Repeat extension Gene Families AT3G22800 67.155 2.30e-162 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03398 - - gmx:100813811 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03398 7 35775656 35777186 Viun7g03398 7 35775656 35777186 ECH