Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03397 ATGGGGAAAACAGGCAAATGGCTTAGAAACTTGTTGACCGGTAAGAAAGACAAGGAAAAGGAGAAGGAAAAATCTACATCTAACCTGAATTTTGCTTCAAATGGAACAGAAAACTCAGCCACTCCAACTTCCACAACCCCAAAGGAGAAAAAGAGATGGAGTTTCAGAAGATCATCAGCCACTTCCACAGCCACACCAACAGCAGTTTCCAAGGAATTGAATTTTGTAGAACAAAGGGTCACTGCTTCACAGACAGTGCAAGCTGACACTGATGATCAGAATGAGGAAAGGAAGCACGCCATGGCTGTGGCTGCTGCCACCGCAGCCGCAGCTGATGCTGCGGTGGCAGCTGCTCAGGCTGTAGCTGTTGTGATCCGTTTGACTTCTGCTTCCAATGCAACATCCAAAAGCATTGAAGAGGCTGCTGCCATTAAAATCCAATCAGTCTTTCGGTCTCACTTGGCAAGGAAAGCATTGTGCGCTCTAAGAGGACTAGTGAAGTTGCAGGCACTGGTAAGGGGTCACTTGGTGAGAAAACAGGCCAAGGAAACACTGAGATGCATGCAGGCTTTGGTAACGGCACAAGCTAGAGCTCGTATTCAGAGGATCCGAATGGGTTCAGAAGGAATTCCTAATCAACAACAGAGAAAAGCCACAGATGATGATTTGTTCAGGCAAATATATAATGAAATGGAGAGAGGCTTAGAAGACAACATCAAGATTGTTGAGATGGATGTGGCTGAAACAAAAAGTAATTCCAGAAGCAGAAGCAGCAGTGTATATCGTGAAGGGCATCAAGAACAGCATGACCATAGATTTTCCACACATTATTCAACGAATGGTTCCTACTCAAAGGAAGAAAACTACAAGGTGTCACCAGCTCCATCAGCATTGACAGAGTTGAGTCCAAGAGAATACAGTGGCCATTTTGAGGACTGTTTCAGTACAGCCCAAAGCAGCCCTCAGTTCTCTGCTGTGTCAAGAACAGAAAATTCAAAGCACCCTTTTTCTTTCCCAAGGACAGATTATGCAGAGTCTATGTGCTATGACTACCCTCTGTTTCCAAATTACATGGCTAACACTGAATCATCAAGGGCCAAAGTGAGATCGCATAGTGCACCGAAACAAAGACCAGATTCATTTGAGAGACAACCAAGCCGGCGAAGAGCTTCAGTAGAGGGAAGAAATGTCCCAAGGCCAATGAGGATGCAAAGGTCATCTTCACATGTGAGTGCTGCTGCTCAAAACTATCAATATCCTTGGTCAATCAAGCTTGACAGATCCGCAGTTTCACTCAAAGACAGCGAGTGTGGCTCTACAAGTACAGTGCTCACTAACACTAATTATTGCAGATCTCTCGTTGCATTTGACCCACGTGGAGATAGGTACTGA 1392 0.4511 MGKTGKWLRNLLTGKKDKEKEKEKSTSNLNFASNGTENSATPTSTTPKEKKRWSFRRSSATSTATPTAVSKELNFVEQRVTASQTVQADTDDQNEERKHAMAVAAATAAAADAAVAAAQAVAVVIRLTSASNATSKSIEEAAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKETLRCMQALVTAQARARIQRIRMGSEGIPNQQQRKATDDDLFRQIYNEMERGLEDNIKIVEMDVAETKSNSRSRSSSVYREGHQEQHDHRFSTHYSTNGSYSKEENYKVSPAPSALTELSPREYSGHFEDCFSTAQSSPQFSAVSRTENSKHPFSFPRTDYAESMCYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRASVEGRNVPRPMRMQRSSSHVSAAAQNYQYPWSIKLDRSAVSLKDSECGSTSTVLTNTNYCRSLVAFDPRGDRY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03397 463 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Viun7g03397 463 MobiDBLite consensus disorder prediction 368 395 - -
Viun7g03397 463 PANTHER IQ-DOMAIN 5-RELATED 1 393 - -
Viun7g03397 463 Gene3D - 138 192 - -
Viun7g03397 463 MobiDBLite consensus disorder prediction 10 26 - -
Viun7g03397 463 Pfam IQ calmodulin-binding motif 166 182 IPR000048 GO:0005515
Viun7g03397 463 Pfam IQ calmodulin-binding motif 141 159 IPR000048 GO:0005515
Viun7g03397 463 MobiDBLite consensus disorder prediction 27 48 - -
Viun7g03397 463 MobiDBLite consensus disorder prediction 365 411 - -
Viun7g03397 463 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
Viun7g03397 463 Pfam Protein of unknown function (DUF4005) 320 396 IPR025064 -
Viun7g03397 463 MobiDBLite consensus disorder prediction 248 289 - -
Viun7g03397 463 MobiDBLite consensus disorder prediction 260 274 - -
Viun7g03397 463 SMART iq_5 138 160 IPR000048 GO:0005515
Viun7g03397 463 SMART iq_5 161 182 IPR000048 GO:0005515
Viun7g03397 463 MobiDBLite consensus disorder prediction 1 67 - -
Viun7g03397 463 MobiDBLite consensus disorder prediction 275 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03397 Viun-Chr7 35765364 35768026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03397 1 453 IQD Protein Family AT4G14750 44.842 2.82e-101 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03397 - - gmx:100817667 704.516