Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03396 ATGGCTGGTAGATTACCCGGTGTTGGTTTACTTGCACGGAAGAGAGCAGAGAACAATCACAGACATGAAAATCGACACAACTATTACCTAAAGGAAGAATCACTCCACCCACCTTCGCTTCCTCTCACTGTCTTAGATCAAACTGCTCTCAAGGCCAGGCAGAGGCTTCACCACAAACTTGGACACTTTTTTTCCTCCTACAGGTCAGGTGAGAATCCGAGGAAAAAAGGGGGGAAAGTGAGGGAAAGCAGTAACCAGAAGAAGGAGGGAGGATTGGGTCGGAAGTTATTAGAGAATTCATGGTTATTGCGTGGGAACAAGGTTAAGGAAGAGAGAAAAGTGTGTGCTGTTTGCCTTGAAGAGTTGGGGGAAGAGCAACAACATGTTATGAACCTTTCGTGCTCCCACAAGTATCATTCTGCATGTCTTCTTCCATGGCTTGCAGCTCATCCTCACTGTCCTTATTGTCGAACTCCAGTACAACTCTGA 489 0.4622 MAGRLPGVGLLARKRAENNHRHENRHNYYLKEESLHPPSLPLTVLDQTALKARQRLHHKLGHFFSSYRSGENPRKKGGKVRESSNQKKEGGLGRKLLENSWLLRGNKVKEERKVCAVCLEELGEEQQHVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPVQL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03396 162 MobiDBLite consensus disorder prediction 65 91 - -
Viun7g03396 162 Pfam Ring finger domain 114 157 IPR001841 -
Viun7g03396 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 161 IPR013083 -
Viun7g03396 162 CDD RING-H2_PA-TM-RING 114 157 - -
Viun7g03396 162 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Viun7g03396 162 SUPERFAMILY RING/U-box 114 160 - -
Viun7g03396 162 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 48 158 - -
Viun7g03396 162 MobiDBLite consensus disorder prediction 72 91 - -
Viun7g03396 162 SMART ring_2 115 156 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03396 72 157 C3H Transcription Factor Family AT3G58720 34.884 5.01e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03396 - - gmx:100527548 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03396 7 35758325 35759333 Viun7g03396 7 35758325 35759333 ECH