Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03389 ATGAACGCCGGCGGAACCGCCACCTTCCGATCCATCCTCGACAAGCCCCTCAACCAGCTCACGGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCATGGAACAAATGGCAGGCGATCCAACAGGTCATTTCCCTCAAAGCGCTTCTCGAACCTTCCGACGATGATTCCCCTCCTCCTCCTCCCCCCATGCACCACCAGCCTCATGCTCCTCAACCTCTAGCCAATTTGACTCAACCTCCGCCCAAGGCCCCTCCTCCTGAGGAACCCGCCTTTCTCGCCGCCGACGACATTCAGAAATCTGCCTCTTCTGGGGAAAAACCTACGGAGACTAATGACACCAACACCAACGCCAACGTTGCTAGCCCCAGAGGGTGTGCAACTAGTGGATCAATTGGCCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACGAGCAATCATGCAGCTTGCTGCAAGTCCTGTCCAGTTTACTCAGGATGATCCTTTACATGGAAATGCACCAGTTTGGTCTTCTCCTTGCCATTTACCGTTGGATAAGGATGGCCTCATCCCTGTTGATACAGCAATCCTTCAGGTTGCTCAAGCAGATAAGATGGTGGAATATCCTCTGCAATACAGAGAGAAAGGGAGCATAACTCGTGATGCTGATATAGATGGTCAAGCAAGCAGAAAAGTGTCATTGCAGCGATATCGTGAAAAGCGTAAGGACAGGGGAAGATTTAAAGGCAAGAAATTGACTGGAATAACTTCGTCTAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATGCCTCAAATGGGAATTCAAGCCGTAGTAGCACTAGCTCTCCACCACAGCCTAGACTGCCTCTAGCTTCCAGTGGTTCAGCTGACAACCAACTCAAAGTTGCCCTTCCCATTGATCTCAATGACAAAGATGTTCATGAATGCTAA 1008 0.494 MNAGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKWQAIQQVISLKALLEPSDDDSPPPPPPMHHQPHAPQPLANLTQPPPKAPPPEEPAFLAADDIQKSASSGEKPTETNDTNTNANVASPRGCATSGSIGQMTIFYCGKVNVYDGVSPDKARAIMQLAASPVQFTQDDPLHGNAPVWSSPCHLPLDKDGLIPVDTAILQVAQADKMVEYPLQYREKGSITRDADIDGQASRKVSLQRYREKRKDRGRFKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTSSPPQPRLPLASSGSADNQLKVALPIDLNDKDVHEC 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03389 335 MobiDBLite consensus disorder prediction 246 267 - -
Viun7g03389 335 MobiDBLite consensus disorder prediction 64 139 - -
Viun7g03389 335 MobiDBLite consensus disorder prediction 67 102 - -
Viun7g03389 335 MobiDBLite consensus disorder prediction 115 139 - -
Viun7g03389 335 Pfam tify domain 147 175 IPR010399 -
Viun7g03389 335 Pfam Jas motif 244 261 IPR018467 -
Viun7g03389 335 SMART tify_2 141 176 IPR010399 -
Viun7g03389 335 MobiDBLite consensus disorder prediction 289 315 - -
Viun7g03389 335 ProSiteProfiles Tify domain profile. 141 176 IPR010399 -
Viun7g03389 335 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 285 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03389 Viun-Chr7 35690972 35696150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03389 5 290 Tify Gene Family AT4G14720 45.667 7.00e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun7g03389 tify 3.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03389 - - gmx:100813937 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03389 7 35690972 35696150 Viun7g03389 7 35690972 35696150 ECH