Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03388 ATGAACGCCGGCGGAACCGCCACCTTCCGATCCATCCTCGACAAGCCCCTCAACCAGCTCACGGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCATGGAACAAATGGCAGGCGATCCAACAGGTCATTTCCCTCAAAGCGCTTCTCGAACCTTCCGACGATGATTCCCCTCCTCCTCCTCCCCCCATGCACCACCAGCCTCATGCTCCTCAACCTCTAGCCAATTTGACTCAACCTCCGCCCAAGGCCCCTCCTCCTGAGGAACCCGCCTTTCTCGCCGCCGACGACATTCAGAAATCTGCCTCTTCTGGGGAAAAACCTACGGAGACTAATGACACCAACACCAACGCCAACGTTGCTAGCCCCAGAGGGTGTGCAACTAGTGGATCAATTGGCCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACGAGCAATCATGCAGCTTGCTGCAAGTCCTGTCCAGTTTACTCAGGATGATCCTTTACATGGAAATGCACCAGTTTGGTCTTCTCCTTGCCATTTACCGTTGGATAAGGATGGCCTCATCCCTGTTGATACAGCAATCCTTCAGGTTGCTCAAGCAGATAAGATGGTGGAATATCCTCTGCAATACAGAGAGAAAGGGAGCATAACTCGTGATGCTGATGGTCAAGCAAGCAGAAAAGTGTCATTGCAGCGATATCGTGAAAAGCGTAAGGACAGGGGAAGATTTAAAGGCAAGAAATTGACTGGAATAACTTCGTCTAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATGCCTCAAATGGGAATTCAAGCCGTAGTAGCACTAGCTCTCCACCACAGCCTAGACTGCCTCTAGCTTCCAGTGGTTCAGCTGACAACCAACTCAAAGTTGCCCTTCCCATTGATCTCAATGACAAAGATGTTCATGAATGCTAA 1002 0.496 MNAGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKWQAIQQVISLKALLEPSDDDSPPPPPPMHHQPHAPQPLANLTQPPPKAPPPEEPAFLAADDIQKSASSGEKPTETNDTNTNANVASPRGCATSGSIGQMTIFYCGKVNVYDGVSPDKARAIMQLAASPVQFTQDDPLHGNAPVWSSPCHLPLDKDGLIPVDTAILQVAQADKMVEYPLQYREKGSITRDADGQASRKVSLQRYREKRKDRGRFKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTSSPPQPRLPLASSGSADNQLKVALPIDLNDKDVHEC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03388 333 MobiDBLite consensus disorder prediction 287 316 - -
Viun7g03388 333 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 281 IPR040390 -
Viun7g03388 333 MobiDBLite consensus disorder prediction 64 139 - -
Viun7g03388 333 MobiDBLite consensus disorder prediction 67 102 - -
Viun7g03388 333 Pfam Jas motif 242 259 IPR018467 -
Viun7g03388 333 MobiDBLite consensus disorder prediction 115 139 - -
Viun7g03388 333 Pfam tify domain 147 175 IPR010399 -
Viun7g03388 333 MobiDBLite consensus disorder prediction 287 319 - -
Viun7g03388 333 SMART tify_2 141 176 IPR010399 -
Viun7g03388 333 ProSiteProfiles Tify domain profile. 141 176 IPR010399 -
Viun7g03388 333 MobiDBLite consensus disorder prediction 236 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03388 Viun-Chr7 35690972 35696150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03388 5 288 Tify Gene Family AT4G14720 45.667 3.16e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun7g03388 tify 3.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03388 - - gmx:100813937 493.426