Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03377 ATGGAGGAAGAGAGCGAATGCTTCGAGTGCCTCCAACTTCGAATAAAGTCGGATTTCTCGGAGGAAGTCTTCTTCAATTATGCCATCTCCAATTCCGCTTTTCCTTTCGGATCCTCAGCTATCGTCAATATTTCTGGTACAACTGATGGCGAAGCTTCGGGCGGTCAGTTCATATTGCAATACATGCCGAGTCGTGATAAGAATTGTTTTATCAATTATGTAAATGAATATAGTTTGGACAGTGGTGAAATTACTACTAGGAGTGGTGATCCTGATATTGGTGGAAGTAAAAATAATGTTATCAAGGGTAGAATTACTTCATCAGATGATTGTGACTCTGGGAAAGCTTTTTCAGGAAACACAAATTGTAGCCATTCTGGAAGGTTTTCTTGCTTGAGGACAATCACCTCACTCTTGCCGATTGCTCATGTGGGAATCTCTTCCAATTCTACGTTTCAAAAGGTGTCCTCTGATTTCTTGTCTGGGTTGATCGAAGACCATGTCTTAAATTCACTTGATCTCTTCGTTGAAGAAAAAGGATCTGGACGGGACAGTATAAATTTCCTGGGTTTAATTGGGTTGCCATCATTTGAAGAGGATGCTTTTCCAGGATCTTTGAGGCATCCTAACATAGCTCCAGTCCTTGCGATTTTTAAAACATCCGATCATGTTAATGTGGTGCTTCCAAAGACTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCAATGCCTTAAAATCTGATTGGAATAGAAGATTTCTTATATATCAACTACTCTCAGCCTTATCGTACGTACATGGTTTAGGGGTTTCTCATGGTAATATATGCCCATCCAATATCATGTTGACTGATTCGTTATGGTGTTGGCTGAGATTATGGAGTGAGCCCGTATTGGAATCTAATTTAACTTCGCAGGAGACTGAAAGCGTTAATTCTGAACCAGCAAGAATTGGTTGTTGTAATGTTGGTTGTCATTCTTATGGCCTTTATGCTGATCTAAAGCTTTCTCCAACAATAGATTGGAATGCTTGCTTTCAGCAGTGGTGGAGAGGAGAAATAAGTAATTTTGAATATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGCGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCTCAAAACCTGATGATAATTGTGATGTAGGGTGGAGAGACTTGAGCAAGAGTAAATGGCGCTTGGCAAAAGGTGATGAACAATTGGATTTCACATATTCAACATCTGAAATCCCTCATCATGTTTCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGACTGCCTTTGAGTGTTCTGAGAATGGCTGTTCGTTCTGTGTATGAACCTAATGAGTATCCTTCCACAATGCAGAGGCTCTATCAATGGACTCCCGATGAATGCATTCCAGAGTTTTACTGTGATGCTCAAATTTTTAAATCAATACATGATGGTATGACTGATTTGGCTGTACCCTCCTGGGCAGAGAGTCCTGAGGATTTCATTAAATTACATTTTGATGCATTAGAAAGTGATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGTTACAAAATGTCTGGCCAGGAAGCTATCGCTGCTAAGAATGTAATGCTTCCTCTATCAGAACCCTTAATGCCAAGATCAACAGGACGTCGTCAGCTCTTTACACAACCACACCCCATACGTCATGCCACTACCAAAACAAAACGTCATGGTTCCAATAAATATGCCAAAGTTTGGAGTCAGGCATATGAAATGCACCAAGAGACATCTCTTCTAGCTGGAACTGCTTATCTACAAGAACTAGAGCAAGCATCTAAATTTTCTGAACATGCTAGGCATTTGAATGCCTGTTACCATTATCCCTCAAATCAAATGACGGGGCAGAACATCTCATCTCTGGGAGATCCATCAACGAAGACATTTAGTGAAAATATAAGCAAACTATCTATGATTGACAGAAATTACCAGGTACCTTATAAAATGAATCTAATTTCTTTTCTTCAACATATGAAAGAAGAAGATGAAGGCTCCTTAGGGTATCCAGACTTGCTACTCTGGAAGCAGAAATTATCTTCTTCAAGACTTTGCTCTGAAGATGTTGCTGGGGACATATTTTCTATTGGTTGTCTCTTGGCTGAAATTCATCTTTCCAGGCCACTCTTTGATCCAGTCTCATTGTCGATATACTTGGAAGATGGAACCTTTCCAGGATTTCTGCAGGATCTACCTCCTAATATTAGATTGCTTGTTGAAGCATGCATCCAAAAGGATTGGACGAGGCGGCCATCTACCAAATTTCTTCTGGAATCACCTTATTTTCCAAAGAGTGTCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAAGACGAAACTCGTCTTCGTTATGCTGCAAATCTTGCAAAGCATGGAGCCCTCAGGGAAATGGGTGCTTTCGCAACTGAAATGTGCACCACTTATTCCTTACCGCTTATAGTGAATGCTGTGAGTGATGTTGAAGCTGAATGGGCATATATGCTTCTGAAGGAATTCATGAAATGCTTAACTGTGCAAGCAGTGAAAACATTAATCCTGCCAACAATACAGAAAATTTTACAGACGACAGGTTATTTACGTTTAAAGGTTGCTCTTCTACAAGATTCATTTGTGAGGGAAATATGGAATCAAGTTGGTAAACAAGCATACCTGGAAACTATTCATCCATTGGTCTTGTCAAACTTGTACAATTCTCCAGATAAAAGTTCAGCTGCCTCTGCTTCAGTGCTTCTAATCAGTTCTAGCGAGGAGCTTGGAGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTACATTGCTTTGGGAAAGGACTATGTGCGGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATTGTTTATTGTCAAACAGATGGTACCTTTACTCAAAAATGTTGTTCGTTCCTTCATTGATGTTTCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGACTGCTTTGGCACTTATTGATTGCATGATGACTTTAGATGGCCTTGTAGCTTTCCTGACAGAAGAGGTCATTGTAAAGCAGCTTCTTGAAGATCTAAGTTGCATACACATAGGGGTTCTTATGCAGAAACATATGGACATTGCAGTGCTTCAGATTGCTGCCTCTACTCTTTTTGGAATTTGTCAACGGATTGGAGCAGATTTGACAGCATTGCATATTGTTCCAAAACTTAAAGAACTATTTGATGAGCTGGCTTTCTCCCAGGAAGTTTCTAAAGGTTCAACTACTCTTGGCAAAAACTTGAAGGCTAGCAAAATAAAATTTGGAGGGGACTTGCATATTGAAAGTCGTGTGGATCTAGTGTTGGTACTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGCTGTGCTACTTGGTTGATTCTTGAACAGTATCTTCTACGTCATCATAATTGGAAGTGGGAATATGCAGGAGAATCATCAAAAAATGGTTCAGAAATTATTCTTGCTAGAAGACCTGTAATATCCCAAGGATTTACATCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGAGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTGCCAAAAATTTGATTCCTCAAAGACGACCATTTAAAGTTCATCAAACTCCAGTAGTAGTGCATGAAGGAATGTCATACCAAACGAACCAAGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCGTCTGGGATGGGCCTGAATTTCTTGGGAGGGTGGGGATTCAGAAAGATGATCTTCCATGGAAGATCAGAGCATCTGTTATACACTCTATACGTGCACATCATGGAGCACTAAGGTCTCTGGCTGTTAACCAAGATGAATGCACTGTTTTTACTGCTGGAATTGGTCAAGGATACAAGGGAACTGTTCAGAAATGGGAATTGAGCCGAACTAATTGTTTGTCCGGCTATCATGGCCATGAGGAGGTTGTGAATGATATTTGCATCTTATCATCAAGTGGAAGAGTGGCATCTTGTGATGGAACAATTCACATTTGGAACAGCCAAACAGGGAAGCAAATATTAGTATTTGCTGAGTCGCAAACAGAATCTAGCCATCCTACAAGCCATCCATCCTCTGCATCAAAGATTAACAGTGACCAGGCAAATGTGCTAAATTTGAATACACTATCAAATGGAATATTGTCTAGTGCTTTCGATTCAAGTCTTTATACTTGTATGCATCAATTATACTCCACTGAAACTCTTGTAGTTGGCACTGGAAATGGTTCTCTGAGGTTCATTGATGTTTCTCGAGGCCAAAAGCTTCATATCTGGAGAGGCGAATCTACTGAATCTACTTTTCCTTCACTTATTTCTGCCATCTGTTCTACTGGCTCTGACAAAATGCAAGCGGGTGGAATTTCCTCTTTGCCGTCTTTTATTGCAGCTGGGCTAAGTTCTGGTCACTGTAAATTATTTGATGCTAAGAGTGGAAATGTCATTACCTCTTGGCGAGCTCACGATGGATATGTGACAAAGTTGGCAGCACCTGAGGAACATCTGCTCATTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTAAGAATGAATTTGCCGTTGCAGCCCGTTATTTTCAGAGGTCATTCAGATGGTATATCCAGCTTCTCCATTTGGGGCCATGATGTTATTTCAATTTCCCGGAGTAGGATTGGGCTTCTCTCCTTGTCTAAATCTGCCAATGAAACAGATGGGCAGCACCACATTATCCCCCAGAGACTCTACGTTTCTGATAACGGTCAGAGAAGCTTGTCAGCGTTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATTGGAACCGAAGATGGTTATCTGAGAATCTGTTGTTAA 4977 0.4063 MEEESECFECLQLRIKSDFSEEVFFNYAISNSAFPFGSSAIVNISGTTDGEASGGQFILQYMPSRDKNCFINYVNEYSLDSGEITTRSGDPDIGGSKNNVIKGRITSSDDCDSGKAFSGNTNCSHSGRFSCLRTITSLLPIAHVGISSNSTFQKVSSDFLSGLIEDHVLNSLDLFVEEKGSGRDSINFLGLIGLPSFEEDAFPGSLRHPNIAPVLAIFKTSDHVNVVLPKTPYNLESILHFNPNALKSDWNRRFLIYQLLSALSYVHGLGVSHGNICPSNIMLTDSLWCWLRLWSEPVLESNLTSQETESVNSEPARIGCCNVGCHSYGLYADLKLSPTIDWNACFQQWWRGEISNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDVGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFKSIHDGMTDLAVPSWAESPEDFIKLHFDALESDRVSFQLHHWIDITFGYKMSGQEAIAAKNVMLPLSEPLMPRSTGRRQLFTQPHPIRHATTKTKRHGSNKYAKVWSQAYEMHQETSLLAGTAYLQELEQASKFSEHARHLNACYHYPSNQMTGQNISSLGDPSTKTFSENISKLSMIDRNYQVPYKMNLISFLQHMKEEDEGSLGYPDLLLWKQKLSSSRLCSEDVAGDIFSIGCLLAEIHLSRPLFDPVSLSIYLEDGTFPGFLQDLPPNIRLLVEACIQKDWTRRPSTKFLLESPYFPKSVKSSYLFLAPLQLVAKDETRLRYAANLAKHGALREMGAFATEMCTTYSLPLIVNAVSDVEAEWAYMLLKEFMKCLTVQAVKTLILPTIQKILQTTGYLRLKVALLQDSFVREIWNQVGKQAYLETIHPLVLSNLYNSPDKSSAASASVLLISSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIVKQMVPLLKNVVRSFIDVSCMNKPDPVQSWTALALIDCMMTLDGLVAFLTEEVIVKQLLEDLSCIHIGVLMQKHMDIAVLQIAASTLFGICQRIGADLTALHIVPKLKELFDELAFSQEVSKGSTTLGKNLKASKIKFGGDLHIESRVDLVLVLYPSFASLLGIEKLRQCCATWLILEQYLLRHHNWKWEYAGESSKNGSEIILARRPVISQGFTSEYNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRPFKVHQTPVVVHEGMSYQTNQEPWFWFPSPATVWDGPEFLGRVGIQKDDLPWKIRASVIHSIRAHHGALRSLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESSHPTSHPSSASKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHQLYSTETLVVGTGNGSLRFIDVSRGQKLHIWRGESTESTFPSLISAICSTGSDKMQAGGISSLPSFIAAGLSSGHCKLFDAKSGNVITSWRAHDGYVTKLAAPEEHLLISSSLDRTLRVWDLRMNLPLQPVIFRGHSDGISSFSIWGHDVISISRSRIGLLSLSKSANETDGQHHIIPQRLYVSDNGQRSLSALSSISILPFSRLFLIGTEDGYLRICC 1658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03377 1658 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1529 1562 - -
Viun7g03377 1658 Gene3D - 1493 1658 IPR015943 GO:0005515
Viun7g03377 1658 ProSiteProfiles BEACH domain profile. 334 606 IPR000409 -
Viun7g03377 1658 ProSiteProfiles Trp-Asp (WD) repeats profile. 1529 1562 IPR001680 GO:0005515
Viun7g03377 1658 Pfam Protein kinase domain 204 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03377 1658 Gene3D Transferase(Phosphotransferase) domain 1 199 296 - -
Viun7g03377 1658 PANTHER GH12955P 3 1658 - -
Viun7g03377 1658 SUPERFAMILY Protein kinase-like (PK-like) 716 791 IPR011009 -
Viun7g03377 1658 Gene3D - 1273 1492 IPR015943 GO:0005515
Viun7g03377 1658 ProSitePatterns Trp-Asp (WD) repeats signature. 1547 1561 IPR019775 -
Viun7g03377 1658 Gene3D BEACH domain 338 579 IPR036372 -
Viun7g03377 1658 Pfam Beige/BEACH domain 347 558 IPR000409 -
Viun7g03377 1658 SUPERFAMILY BEACH domain 325 578 IPR036372 -
Viun7g03377 1658 SUPERFAMILY WD40 repeat-like 1298 1656 IPR036322 GO:0005515
Viun7g03377 1658 SMART WD40_4 1341 1378 IPR001680 GO:0005515
Viun7g03377 1658 SMART WD40_4 1411 1460 IPR001680 GO:0005515
Viun7g03377 1658 SMART WD40_4 1295 1338 IPR001680 GO:0005515
Viun7g03377 1658 SMART WD40_4 1522 1560 IPR001680 GO:0005515
Viun7g03377 1658 SMART WD40_4 1623 1658 IPR001680 GO:0005515
Viun7g03377 1658 SMART Beach_2 346 578 IPR000409 -
Viun7g03377 1658 Pfam WD domain, G-beta repeat 1524 1560 IPR001680 GO:0005515
Viun7g03377 1658 Pfam WD domain, G-beta repeat 1343 1378 IPR001680 GO:0005515
Viun7g03377 1658 Gene3D Transferase(Phosphotransferase) domain 1 698 798 - -
Viun7g03377 1658 SUPERFAMILY Protein kinase-like (PK-like) 205 291 IPR011009 -
Viun7g03377 1658 CDD Beach 347 578 IPR000409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03377 Viun-Chr7 35625953 35635271 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Viun7g03377 Beach 5e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03377 K17601 - gmx:100810047 3047.3