Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03366 ATGGCGATGAAGGCTACTTTCAGCAATATGGCAGACGTGCTTCTTGACTGGGATGACGTCCACAATGACGACTTTTGTTCTTGGCGTGGAGTTTTCTGCGAAAATGGCAGCCTTACTGTGATTTCTCTGAACTTGTCCAGCTTGAACCTCGGCGGGGAGATATCCCCAGCCATTGGTGACTTGAAAAACTTGCAGTCAATAGACTTGCAAGGGAATAAATTAACCGGGCAAATCCCAGATGAAATTGGAAACTGTGCGGCACTTTTTCTTTTGGATTTGTCTGATAATCAGCTTTATGGTGATATACCTTTCACCCTGTCAAAGCTAAAGCAACTTGAGTTTTTGAATTTAAAGAGTAATCAGTTAACTGGTCCTATCCCTTCAACCCTAACCCAAATTCCAAATCTCAAGACTCTTGATCTTGCTCGAAATATGCTCACTGGAGAGATCCCAAGATTACTCTATTGGAATGAAGTCTTGCAGTACCTTGGATTACGAGGGAACATGTTGAGTGGTACTCTGTCTCCTGATATATGCCAATTAACTGGATTGTTGTATTTTGATGTGAGAGGCAACAATTTGACTGGTACTATACCTGACAGCATAGGGAACTGTTCAAGTTTTGAAATCTTTGACATATCATATAATCAGATTACTGGAGAGATTCCATTTAGTATTGGGTTTCTGCAAGTTGCTACTTTGTCACTTCAAGGAAATAGATTAACTGGGAAGATTCCAGAAGTGATTGGTTTGATGCAAGCCCTTGCAATATTGGATTTGAGTGAGAATGAGTTAGTGGGATCAATTCCCCCGATACTTGGGAATCTGACCTTCGCTGGAAAGCTGTACCTTAATGGAAACATGCTTACTGGCCCGATACCTCCTGAACTAGGCAATATGTCCAAACTGAGCTACTTGATATTGAATGACAACCACCTAACTGGTGAAATTCCAAATGAGTTAGGGAAGCTAGAACATCTTTTTGAATTGAATCTTGCCAATAATCATTTTGATGGAACTATTCCACGTAACATAAGCTCCTGCACAGCCTTAAATCAGTTTAATGTGCAAGGTAATAAGTTAAGTGGTTCCATTCCATTGAGCTTCCGCAACCTTGGTAGTTTGACATACTTAAATCTATCTGCAAACAACTTCAAGGGGACCATACCCGTCGAGTTGGGGCATATTATTAATCTAGATACATTGGATCTATCATGCAATAAATTTTCAGGAAATGTTCCAGCATCTGTTGGTTATCTGGAACATCTCTTGACCCTCAACTTGAGTCACAACCATCTTGGAGGTTCCTTGCCAGCTGAATTTGGGAATCTCAGAAGCATTCAAATTCTTGACATGTCATTCAACAATCTCTCTGGTAGCATACCTCCGGAAATTGGACAGCTGCAGAACCTTATGTCTTTGATTATGAACAACAACGATCTGCGTGGGAAAATTCCTGATCAGATGACTAATTGTTTTAGTCTTACAGTATTAAATTTGTCCTATAACAACCTTTCCGGTTTAATTCCTTCAATGAAGAACTTTTCAAGGTTTTCAGCTGACAGCTTCTTTGGAAATTCATTATTATGTGGAGATTGGTTGGGATCGATATGTCGTCCTTACATTCCAAAATCAAGAGTGATTTTCTCCAGAGTTGCTGTTTTATGTCTCACGCTGGGAATTATGATATTGTTAGCTATGGTCATTGTAGCCTTCTATAGATCCAGCCAATCTAAACAATTGATGAAGGGATCTAGCAGAACTGGAGAAGGTCCTCCAAGACTAGTTATTCTTCACATGGATATGGCTATCCACACCTTGGATGATATAATGAGAAGCACTGAGAATCTCAATGAGAAATATATCATAGGTTATGGTGCCTCTAGTACTGTATACAAATGTGTTTTGAAGAATTCCCGACCAATTGCAATTAAGCGACTGTATAATCAACAACCACACAATTTAAAGGAGTTTGAGACCGAACTTGAGACAGTTGGTAGCATCAGACATAGGAACCTTGTCACCTTGCATGGATATGCACTCACTCCCGATGGAAATCTTCTTTTCTATGACTATATGGCGAATGGCTCGTTGTGGGATCTTCTACATGGTCCCTCGAAGGTAAAACTTGATTGGGACACACGCCTGAGGATTGCTGTTGGAGCAGCCGAAGGACTAGCTTATCTCCATCATGACTGTAACCCGCGTATAGTTCATAGGGACATAAAATCTTCGAATATTTTGCTGGATGAGAACTTTCAGGCTCATCTATCTGATTTTGGTACTGCAAAATGCATCTCGACCACGAGAACTCATGCATCGACCTATGTCCTTGGAACCATAGGCTATATTGACCCTGAGTATGCCCGAACATCTAGGCTGAATGAAAAATCAGATGTGTATAGCTTTGGCATAGTTCTTTTGGAGCTACTAACTGGAAAGAAGGCAGTGGACAACGAGTGTAATTTGCATCAACTGATATTGGCGAAGACAGATAACAACACTGTGATGGAGGCTGTGGATGCAGAGGTGTCTATAACCTGCATTGATCTAGCTCATGTTAAGAAGACCTTTCAGCTTGCTTTGCTTTGCACGAAAAAGAACCCTTCTGAGAGGCCTACCATGCATGAAGTAGCAAGGGTTCTGGTATCGCTACTTCCTTCACCTCCAAGTAAGATTCTTGCTCCACCTGCGAAGAAGTTTGACTATGCCAATTTTGTGATCGAGAAGGGACAACCTCGAAAAGTGGAAGGACAACCTCACCAAGAAGATAACAACTCAACCAATGCTCAATGGTTTGTTCGCTTTGGGGATGTTATATCCAAGAGCACTTGA 2835 0.4109 MAMKATFSNMADVLLDWDDVHNDDFCSWRGVFCENGSLTVISLNLSSLNLGGEISPAIGDLKNLQSIDLQGNKLTGQIPDEIGNCAALFLLDLSDNQLYGDIPFTLSKLKQLEFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNMLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLLYFDVRGNNLTGTIPDSIGNCSSFEIFDISYNQITGEIPFSIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGSIPPILGNLTFAGKLYLNGNMLTGPIPPELGNMSKLSYLILNDNHLTGEIPNELGKLEHLFELNLANNHFDGTIPRNISSCTALNQFNVQGNKLSGSIPLSFRNLGSLTYLNLSANNFKGTIPVELGHIINLDTLDLSCNKFSGNVPASVGYLEHLLTLNLSHNHLGGSLPAEFGNLRSIQILDMSFNNLSGSIPPEIGQLQNLMSLIMNNNDLRGKIPDQMTNCFSLTVLNLSYNNLSGLIPSMKNFSRFSADSFFGNSLLCGDWLGSICRPYIPKSRVIFSRVAVLCLTLGIMILLAMVIVAFYRSSQSKQLMKGSSRTGEGPPRLVILHMDMAIHTLDDIMRSTENLNEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQQPHNLKEFETELETVGSIRHRNLVTLHGYALTPDGNLLFYDYMANGSLWDLLHGPSKVKLDWDTRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFQAHLSDFGTAKCISTTRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNECNLHQLILAKTDNNTVMEAVDAEVSITCIDLAHVKKTFQLALLCTKKNPSERPTMHEVARVLVSLLPSPPSKILAPPAKKFDYANFVIEKGQPRKVEGQPHQEDNNSTNAQWFVRFGDVISKST 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03366 944 SUPERFAMILY L domain-like 274 531 - -
Viun7g03366 944 Gene3D Transferase(Phosphotransferase) domain 1 693 890 - -
Viun7g03366 944 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 158 267 - -
Viun7g03366 944 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 132 883 - -
Viun7g03366 944 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 693 892 - -
Viun7g03366 944 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 268 541 - -
Viun7g03366 944 Gene3D Ribonuclease Inhibitor 415 540 IPR032675 -
Viun7g03366 944 Gene3D Ribonuclease Inhibitor 317 414 IPR032675 -
Viun7g03366 944 Gene3D Ribonuclease Inhibitor 1 158 IPR032675 -
Viun7g03366 944 Gene3D Ribonuclease Inhibitor 230 316 IPR032675 -
Viun7g03366 944 Pfam Leucine rich repeat N-terminal domain 2 33 IPR013210 -
Viun7g03366 944 Gene3D Ribonuclease Inhibitor 159 229 IPR032675 -
Viun7g03366 944 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Viun7g03366 944 SUPERFAMILY Protein kinase-like (PK-like) 597 882 IPR011009 -
Viun7g03366 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Viun7g03366 944 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 588 692 - -
Viun7g03366 944 Gene3D Phosphorylase Kinase; domain 1 585 692 - -
Viun7g03366 944 Pfam Leucine Rich Repeat 63 85 IPR001611 GO:0005515
Viun7g03366 944 ProSiteProfiles Protein kinase domain profile. 617 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03366 944 Pfam Leucine Rich repeat 492 506 IPR001611 GO:0005515
Viun7g03366 944 SMART serkin_6 617 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03366 944 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 1 157 - -
Viun7g03366 944 Pfam Leucine rich repeat 398 457 IPR001611 GO:0005515
Viun7g03366 944 Pfam Protein kinase domain 619 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03366 944 SMART LRR_typ_2 444 468 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 372 396 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 420 443 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 61 85 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 109 132 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 181 205 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 324 348 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 133 157 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 300 323 IPR003591 -
Viun7g03366 944 SMART LRR_typ_2 252 276 IPR003591 -
Viun7g03366 944 SUPERFAMILY L domain-like 19 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03366 Viun-Chr7 35537645 35543526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03366 63 944 Receptor kinase-like Gene Family AT5G07180 75.991 0.0 1342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Viun7g03366 Pkinase 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03366 K20718 - gmx:100811653 1697.18