Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03353 ATGCCATCTCGACAACTCTCCACGTCACCACAACCTTCTAACCACCGCATCTTAACCCCTCCGGTAACTTCCACCGCCTCCCTTTGCTCTTTATTCTTTTTACTTTGCCTCTGCTTCCGTAAGCGTAAACGCACAACCCCTTCCTCCGACTCCGATTCCACCCCCCCTCACCCCTTCTCCTACGCCCTCCTCCGCCGCGCCACCAACTCCTTCTCCACGCGCCTCGGCCACGGAGGCTTCGGCCCTGTCTTCGCCGGCACCCTTGCCGGCGATCCCGTTGCCGTCAAGCTCATGGACTCTGCCTCCCAGCAGGGAGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCGTCCAGGCTTCGCTCCCCCTCTCTCGTCCCCGCCATCGGCTTCTCCTCCGACCCCAAACGTCGGCGTTTCCTCCTCGTCTACCACCTCATGCACAACGGCAACCTCCACGACGCCCTCTTGCGCTCCAAAACCCCTCACCTAAAGACCTGGAAAAACCGCTTCTCCATTATCCTCGACATCGCCAAAGGCATCCACTACCTCCACTCGCTCGACCCCCCGGTCATCCACGGTGACATCAAACCCTCCAACATTCTCCTCGACAACACCTTCTCTGCAAAACTCGCCGACTTCGGCCTTGCGCGCCTAAAACCCCATGTCCAAGTCCAAGAGTTCAAAGCAAAGCGCGACGAGAAGAGAAGGGACGAGTCCGAGAGCGACGGTAGGTCGGAGTTAGAAACTCTGAGCGTCAAGACGGAGCAATCGTTTGAAGGTAACACCGGGTCGGATTATGTGATGGATTGGATTGGGAAGGAGTTGAAGAAGGAAAGGCCGACGGCGGTGGAGAAGGTTTCTTCTGGGTCGAGCAGTGGTCTAGCGGAGAAGAAGAAAAGTCGGAAGAAATTGGAGTGGTGGGAGACGATGGATGATAGTGGAGTTCCGAAGAAGGAAAAGAGAAGGGCAGCGAGGGAATGGTGGAAGGAAGAGTATTCAGAAGAGCTTGCGAGGAAGACGAAGAAAAAGAAAAAGAAGGAGAAGAGAAAGAAAAAGGGTGTTAACGATGATGATGATGGTGATTTGGAGATAGATAATGGCGAAGTAAATGTTTACAAGAGGGAGAAGAACCGGAGTAGGAGAAGTGGTGGTAGTGTAGATTCTTGGTTGAGTGGGGAAGTACATGGAGGAGTTGGATGGAACAGCTACGATTCAGGGACTTGTAGCGGTGAAATAGTGGGCAAGAGTGGTGGTGTGAGTAGTACTCCGAGTATGAGGGGAACGGTTTTCTACGTGGCTCCTGAGCATGGTTACAATGGGGATGTTTCCGAGAAGTGCGACGTGTACAGTTTCGGGGTTTTGTTGCTTGTTATTGTTTCAGGGAGGAGGCCGCTTCAGGTGACAGGGTCGCCCATATCGGAGCTTCAACGTGCGAATCTGGTGACTTGGGCGAGGATATGTGGTCGGAGGGGGAAGGTTCTAGAAGTGGTGGATGAGGGTGTTGAGGGGTTGGACAAAGAACAGGCAAGTCTGTGCGTGACGGTTGCGCTGGCTTGTTTGCTAAAGTCACCGACCCGTCGACCTTCCATGAAGGAGGTTCTGGGAATGCTAAGTGGGGAGCTGGAGCCTCCGCAGTTGGCGCGCAATAGTTTCCCCCTCAACTCCAGGAACCAAGGTCGGTGA 1683 0.5449 MPSRQLSTSPQPSNHRILTPPVTSTASLCSLFFLLCLCFRKRKRTTPSSDSDSTPPHPFSYALLRRATNSFSTRLGHGGFGPVFAGTLAGDPVAVKLMDSASQQGEREFHNELFFASRLRSPSLVPAIGFSSDPKRRRFLLVYHLMHNGNLHDALLRSKTPHLKTWKNRFSIILDIAKGIHYLHSLDPPVIHGDIKPSNILLDNTFSAKLADFGLARLKPHVQVQEFKAKRDEKRRDESESDGRSELETLSVKTEQSFEGNTGSDYVMDWIGKELKKERPTAVEKVSSGSSSGLAEKKKSRKKLEWWETMDDSGVPKKEKRRAAREWWKEEYSEELARKTKKKKKKEKRKKKGVNDDDDGDLEIDNGEVNVYKREKNRSRRSGGSVDSWLSGEVHGGVGWNSYDSGTCSGEIVGKSGGVSSTPSMRGTVFYVAPEHGYNGDVSEKCDVYSFGVLLLVIVSGRRPLQVTGSPISELQRANLVTWARICGRRGKVLEVVDEGVEGLDKEQASLCVTVALACLLKSPTRRPSMKEVLGMLSGELEPPQLARNSFPLNSRNQGR 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03353 560 Gene3D Transferase(Phosphotransferase) domain 1 146 263 - -
Viun7g03353 560 Pfam Protein kinase domain 422 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03353 560 SMART serkin_6 69 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03353 560 MobiDBLite consensus disorder prediction 227 260 - -
Viun7g03353 560 MobiDBLite consensus disorder prediction 338 364 - -
Viun7g03353 560 Pfam Protein tyrosine and serine/threonine kinase 71 221 IPR001245 GO:0004672|GO:0006468
Viun7g03353 560 SUPERFAMILY Protein kinase-like (PK-like) 56 546 IPR011009 -
Viun7g03353 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Viun7g03353 560 PANTHER OS07G0586332 PROTEIN 259 548 IPR044576 -
Viun7g03353 560 Coils Coil 329 349 - -
Viun7g03353 560 MobiDBLite consensus disorder prediction 278 297 - -
Viun7g03353 560 Gene3D Phosphorylase Kinase; domain 1 57 144 - -
Viun7g03353 560 Gene3D Transferase(Phosphotransferase) domain 1 404 547 - -
Viun7g03353 560 MobiDBLite consensus disorder prediction 227 249 - -
Viun7g03353 560 ProSiteProfiles Protein kinase domain profile. 69 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03353 Viun-Chr7 35436056 35438339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03353 415 537 Receptor kinase-like Gene Family AT3G58690 34.109 4.64e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Viun7g03353 PK_Tyr_Ser-Thr 6.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03353 - - pvu:PHAVU_007G064200g 890.567