Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03352 ATGTTTCCTTTACAACGCGGCAATGAGCTGGTGATCCAATTTTCTAATGCTCTCCAACCGCAACACAAAATCTCTAAAGATCTCGTTCCGGATGATCACAACAGCGATAATTCTCCCCTTGTCGCTTATTCAGATAAAAAATTGAGTACCAGCCGCCACAACAAACTCTTTTATGCGCCTGAACCAAGTCAACCTAATTCTGCAGAAGAAGAACATGCAAAAAAGATGGTTCACAGAGAGATTGAGAGGCAAAGGAGGCAAGAAATGGCAACCCTTCATGCCTCTCTTAGATCCCTTCTCCCTCTTTCCTTCATCAGGGGAAAGAGGTCGATATCTGATCAAATGAGCGTGGCGGTGAATTACATAAAGCACCTGCAGAAGAATATTAAAGAATTGAATGAGAAGAGGGATAATCTGAAGAAGAAAATTGCCATAAATTACAGCCTCGAAAGCCGTGAGAAGAAGCATGAATCTAGTGGTTTCACTGTCCACCAAAAAAGTTGTGGAACTGTGGGGATTGAATTCAGTGGATTGAGTGAGGAAGTGGTTTCACTTTCTAAACTGGTGGAACTAGTGTTAGAAGAGGGACTTGAAGTTGTTTCTTGTCTTTCAACTAAAGTCAATGGCAGACTACTCCACAGTTTGCAGTGTGAGGTTGTCAATTCCGACAGTGTAGATCTATCTGAACTGAGAAGAAGATTCTCCGATGTAATTCCATCATTTGGAGTTTCTGAATAA 738 0.416 MFPLQRGNELVIQFSNALQPQHKISKDLVPDDHNSDNSPLVAYSDKKLSTSRHNKLFYAPEPSQPNSAEEEHAKKMVHREIERQRRQEMATLHASLRSLLPLSFIRGKRSISDQMSVAVNYIKHLQKNIKELNEKRDNLKKKIAINYSLESREKKHESSGFTVHQKSCGTVGIEFSGLSEEVVSLSKLVELVLEEGLEVVSCLSTKVNGRLLHSLQCEVVNSDSVDLSELRRRFSDVIPSFGVSE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03352 245 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 64 236 - -
Viun7g03352 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 125 IPR011598 GO:0046983
Viun7g03352 245 SMART finulus 79 131 IPR011598 GO:0046983
Viun7g03352 245 FunFam Transcription factor bHLH126 65 153 - -
Viun7g03352 245 CDD bHLH_AtORG2_like 74 150 - -
Viun7g03352 245 Gene3D - 64 156 IPR036638 GO:0046983
Viun7g03352 245 Pfam Helix-loop-helix DNA-binding domain 74 126 IPR011598 GO:0046983
Viun7g03352 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 146 IPR036638 GO:0046983
Viun7g03352 245 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03352 Viun-Chr7 35430146 35431877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03352 78 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 41.808 7.26e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Viun7g03352 HLH 4.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03352 - - pvu:PHAVU_007G064300g 362.459