Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03349 ATGAAGTTTAAATGTTTCAGCTGTTTTCTTTGTGATAAAGAGCAATCCGAGATGCAAAACGGCAGAGAGAAGAAGAAAAGGGACTATCCATGGGAAATATACACCTTGAAGGAATTGCTTCGTGCAACAAATAATTTTCATCAAGATAACAAGATAGGAGAGGGTGGCTTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGGATCGCAGTAAAGCGGTTGAAGACGATGACTGCAAAGGCAGAGATGGAGTTTGCGGTGGAAGTGGAAGTACTGGGAAGGGTGAGGCATAAGAATTTGTTGGGGTTGCGTGGATTCTATGCAGGAGGTGATGAAAGGTTGATTGTGTATGATTACATGCCTAATCACAGTTTGCTGAATCATTTGCATGGTCAACTTGCCAAAGATTGTTTGTTAGATTGGCCTAGAAGAATGAACATAGCAATTGGAGCAGCTGAAGGCTTGGTGTATTTGCACCACGAGGCAAATCCTCACATCATTCATAGAGACATAAAGGCAAGCAATGTTCTTTTGGACTCTGAATTTGAAGCGAAGGTTGCTGATTTTGGGTTTGCTAAGCTGATACCAGAGGGTGTGAGCCATCTGACAACAAGGGTTAAAGGCACTCTTGGATATTTGGCTCCAGAATATGCCATGTGGGGGAAGGTTTCTGAGAGCTGTGATGTTTACAGTTTTGGGATTTTGCTTTTGGAGATTGTGAGTGCCAAGAAGCCAATTGAGAAACTCCAAGGAGGAGTGAAAAGGGATATAGTTCAGTGGGTTACACCTCATGTTCAAAAGGGTAACTTCACTCATATTGTTGATTCAAAATTAAAGGGACGATTTGATTTAGAGCAGTTGAAATCTGTGATCATGATAGCTGTAAGGTGCACAGAAAGTAATCCAGAAAAAAGGCCTAGCATGGTAGAGGTGGTGGAGTGGCTCAAGGGTGGCATTGGAAGAAGAAAAGAGATTCTTCCAACTTTAAGTCACACCAATGGAGATGATAAATATGAAGAAAACTACGGAGAGATTAGAAGAACACAGTCCAGGTTGAAAATACCAAGTGATGATGATAAACTTAGAATAAGATAA 1095 0.4119 MKFKCFSCFLCDKEQSEMQNGREKKKRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLNHLHGQLAKDCLLDWPRRMNIAIGAAEGLVYLHHEANPHIIHRDIKASNVLLDSEFEAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSAKKPIEKLQGGVKRDIVQWVTPHVQKGNFTHIVDSKLKGRFDLEQLKSVIMIAVRCTESNPEKRPSMVEVVEWLKGGIGRRKEILPTLSHTNGDDKYEENYGEIRRTQSRLKIPSDDDKLRIR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03349 364 Gene3D Transferase(Phosphotransferase) domain 1 120 323 - -
Viun7g03349 364 SUPERFAMILY Protein kinase-like (PK-like) 28 330 IPR011009 -
Viun7g03349 364 SMART serkin_6 46 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03349 364 ProSiteProfiles Protein kinase domain profile. 46 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g03349 364 ProSitePatterns Protein kinases ATP-binding region signature. 52 72 IPR017441 GO:0005524
Viun7g03349 364 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 119 - -
Viun7g03349 364 FunFam PTI1-like tyrosine-protein kinase At3g15890 120 329 - -
Viun7g03349 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Viun7g03349 364 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 319 - -
Viun7g03349 364 Gene3D Phosphorylase Kinase; domain 1 9 119 - -
Viun7g03349 364 Pfam Protein kinase domain 46 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03349 Viun-Chr7 35405061 35406872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03349 22 342 Receptor kinase-like Gene Family AT5G45780 42.342 2.60e-84 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Viun7g03349 Pkinase 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03349 - - gmx:100817283 662.144