Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03321 ATGGATGGCAACCCTTTTGGAAACGTGCCACCCCCACCAATACAAGTCCCTGATAACTTCCCTCACTCGTCCTCCTCTTCGCCAACCCCAACCACGTCCTCTCCGTCTCCCACTCCTTCCGCCGGCTTCCGCTACCGCGGGACGCGCTCCCGCAGCGGTAAGTGGGTGTCGGAGATAAGGGAGCCACGTAAAACCAAGCGCATTTGGCTCGGGACATACCCGGCAGCGGATATGGCTGCGGCGGCCTATGATGTCGCGGCTCTCGCGTTGAAGGGACCCGACACGCCCCTTAACTTCCCCAATTCCATACTCTCCTACCCGATTCCCGCGTCATTGTCCGCCACTGATATTCGCGCGGCGGCTGCGGCAGCAGCGCAGGCTAGGCTCGTGAGGACGCCGCTGGAGGGTGGGCAAGTGGTAAACCCTGATATGGGACAGGAGTCGGAGAGGCGTGACGAGTACTATGATGAGGATGAGTTGTTGAACATGCCGAATTTGCTTGATGACATGGCCAGGGGAATGCAGGTTAGTCCCCCTAGGATCACTTCCTTTTCTTCTGATGATTCGCCTGCCAATTCTGATGGAGATAACCTTTGGAGCTATACCCTCTGA 612 0.5784 MDGNPFGNVPPPPIQVPDNFPHSSSSSPTPTTSSPSPTPSAGFRYRGTRSRSGKWVSEIREPRKTKRIWLGTYPAADMAAAAYDVAALALKGPDTPLNFPNSILSYPIPASLSATDIRAAAAAAAQARLVRTPLEGGQVVNPDMGQESERRDEYYDEDELLNMPNLLDDMARGMQVSPPRITSFSSDDSPANSDGDNLWSYTL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03321 203 MobiDBLite consensus disorder prediction 178 203 - -
Viun7g03321 203 Pfam AP2 domain 49 92 IPR001471 GO:0003700|GO:0006355
Viun7g03321 203 Gene3D AP2/ERF domain 43 102 IPR036955 GO:0003700|GO:0006355
Viun7g03321 203 ProSiteProfiles AP2/ERF domain profile. 44 100 IPR001471 GO:0003700|GO:0006355
Viun7g03321 203 SMART rav1_2 44 106 IPR001471 GO:0003700|GO:0006355
Viun7g03321 203 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Viun7g03321 203 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Viun7g03321 203 PRINTS Ethylene responsive element binding protein signature 82 102 IPR001471 GO:0003700|GO:0006355
Viun7g03321 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 174 - -
Viun7g03321 203 MobiDBLite consensus disorder prediction 19 45 - -
Viun7g03321 203 MobiDBLite consensus disorder prediction 1 18 - -
Viun7g03321 203 MobiDBLite consensus disorder prediction 1 56 - -
Viun7g03321 203 MobiDBLite consensus disorder prediction 177 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03321 Viun-Chr7 35188836 35190397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03321 45 201 AP2-EREBP Transcription Factor Family AT5G52020 57.059 4.65e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun7g03321 AP2 2.5e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03321 - - gmx:100776717 317.39