Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03311 ATGGACGGGGATGGAAATGAGTTGGGTATTTTGCATGAAGTTGGTGTTGATGTTGGACCTCAGATGTCCAATAACTTGGACTTGAATGTGGAGCAGAACTATTGTAGTCCAAACATTGCTCATGCTAGTGACAATCAATCTTGTCCTCCATCAAAAAATGTACTCAGCACAAATACTGTGTTGGGAATTGGTACAGAATTCGAGTCTGATGATCATGCATACCGATTCTATAATAAGTATGCCAGATTGGTGGGTTTCAATGTTAGAAAAGATTGGATAAATAGGAGTAAGGTGCATGGTCAGGTGGTGTCTAGGAAGTTTACCTGCTCCAAAGAGGGATACCGCAGGAAAGACAAAAGGGATGTCAATGTGAAGAAGCATAGGAAGGAAACGAGAACTGGCTGCTTGGCACATATGATCGTCACTCGGCAGCCAAATGGAAAGTACCAGGTCACCCATTTTGAAGTACAACATAATCATGACAATGTAAACCCTAACAATGCTAACGTGGTAAACTTGCTAAATGAATTTAGTGTTGCTCATGCTGTGGAAGCTGAACCAAACAATAGTTTGGGACCTAAATCAAAGTCAGCATTAGATATGTTGAATAAAAAAATAAGTGCACGTGAATCTCTTGATATACTTTCAGTGAATTATGACAACTATCTTCACTGTGCAAGGGAAAGAGATATGAGGGAAGGAGAAGCAGGGCATTTGCTTGGTTACTTCCAAAGGCAGCACTTTGAAAATCCGACATTTTTTTATGCCATACAGCTTGATGTTGATGACAAGGTTAGCAATATTTTTTGGGCTGATGACAGTATGGTCGTGGATTATGATCACTTTGGAGATGTCATTTGTTTGGATACAATTTGCAAAACAAATGAAGATTTTCGGCCATTTATACAGTTTTTAGGTGTTAACCATCATAGACAAGTATTAATATTTGCTGCTGCTTTTCTATATGATGATTCCATTGAATCATTTACTTGGTTATTTCGAACTTTCATTAATGCTATGTCTGGGAAAAAGCCAAAGGCCATTCTCACAGAACAAGAAGCTGTAATCATTGAAGCAGTCAATACAGTTTTACCTGACACAGACCATTGTACTTGTGTATGGCAGTTGTATGAGAACACTTTGAAACACCTCAACCATGTTGTAAAGGATGCGGAATCTTTTGCAAATGATCTGCGGAGCAGTATTTATGACCCCAAGGATGAGGAGGAATTTACTCATTCTTGGGAAACTATGCTAGAGAAGTATAATCTGCAGCAAAATGAATGGCTGAGATGGATGTATAGAGAAAGAGAGAAATGGGCTGTTGTCTTTGGTCGGAATACATTTTTTGTAGACATCAAAGGCTTTCATTTAGCTGAGATTTTGTCTCATAAGTTTAGAAGTTATCTAAATCCTGACCTTGATGTCTTTCAATTTTTTAAGCATTTTGAAATGGTAGTAGGTGAACAACGTTATAAAGAAATAGAAGCTAGTGATGTAATGAGCAGGTCTTTGCCAAGGCTAATGGGTAATGTGGTTCTGTTGAAGCATGCAAGTAATATTTATACACCAAGAGCGTTTGAAGTATTTCAGCGAGCATATGAGAAGTCTTTGAATGTTATTGTTAATCAACACAGTAGAAATGGATCATTGTTTCAGTACAAAGCAAATACATTTGGGCATAATAGACAATATAGTGTCACCTTCAATTCCTCTGATGACACAGTTGTCTGCAGTTGTATGAAGTTTGACCGTGTTGGATTTCTGTGTGATCACGCGCTTAAAGTTCTTGATCAAAGAAACATAAAAGTAGTTCCACCTCAGTACATCTTGCAGAGATGGACTGAAGATGCGAGGATGGGAAATCGTAGAGAGATTAAGCAATGTAAAATGCAAGATAGTCCTAAAAGGGTTGTTGCTAGCTGTTACAAAGACTTGTGCCACAGACTGCTCAAGTTGTCAACAAGAGCGTCTGAATCCGAGGAGGCCTATCAATTTGTTATGAGGCAACTTGATGAAGTGATGGTAGGAGTGGAGAAAATCTTAACACCGAAAGCTGAAGGTGAAGTTGTCACCTCACTTAATATTGATGCAGATGCTTCAGAAAGTGAGCCTGCAAAGATCTTTCCGAATGATCATGTTATTGAGGATCAGGATGAAAGTACCAGCGCAAATAGTGGAAAAGACAGGAGAGCCACGTCAGGCAGGGGGCACTTAACAACCGTGACATGTAGTGGAGCTGATTCTGACAGGATTTTGAATGTAGAAGAATCACCGCAAAATACCGATATCTGTATTTCGAGGCCCCCCTCTACATATGTTTCATCTCAGCCTGCAGCACCAAATCCGATTCTGCAGGGTTTGTACAGTTTTGAAGGCAATCAAGTGGTGCACTGCATGTGTGAGCAGACTAATCTTATGGTGGACAGTCAATCTAATTCTACCATGATGCAACCGCAAGACATCTTTTCTAACCCACAGGATTCTCCTGGTCAATCTCAACTATTGCAGGAGCCTATAATCCAGAGCACGTATCTTGAGTCCATGCCGAGCAATAATCAGATGCGGCAGGGAATGGATCTTGACATCCAAAATCCTCATTCGTCGTCGTTCTTGCTGTATGACCATAGATACAGAAGTTCTGAGTCTGCATGA 2655 0.3996 MDGDGNELGILHEVGVDVGPQMSNNLDLNVEQNYCSPNIAHASDNQSCPPSKNVLSTNTVLGIGTEFESDDHAYRFYNKYARLVGFNVRKDWINRSKVHGQVVSRKFTCSKEGYRRKDKRDVNVKKHRKETRTGCLAHMIVTRQPNGKYQVTHFEVQHNHDNVNPNNANVVNLLNEFSVAHAVEAEPNNSLGPKSKSALDMLNKKISARESLDILSVNYDNYLHCARERDMREGEAGHLLGYFQRQHFENPTFFYAIQLDVDDKVSNIFWADDSMVVDYDHFGDVICLDTICKTNEDFRPFIQFLGVNHHRQVLIFAAAFLYDDSIESFTWLFRTFINAMSGKKPKAILTEQEAVIIEAVNTVLPDTDHCTCVWQLYENTLKHLNHVVKDAESFANDLRSSIYDPKDEEEFTHSWETMLEKYNLQQNEWLRWMYREREKWAVVFGRNTFFVDIKGFHLAEILSHKFRSYLNPDLDVFQFFKHFEMVVGEQRYKEIEASDVMSRSLPRLMGNVVLLKHASNIYTPRAFEVFQRAYEKSLNVIVNQHSRNGSLFQYKANTFGHNRQYSVTFNSSDDTVVCSCMKFDRVGFLCDHALKVLDQRNIKVVPPQYILQRWTEDARMGNRREIKQCKMQDSPKRVVASCYKDLCHRLLKLSTRASESEEAYQFVMRQLDEVMVGVEKILTPKAEGEVVTSLNIDADASESEPAKIFPNDHVIEDQDESTSANSGKDRRATSGRGHLTTVTCSGADSDRILNVEESPQNTDICISRPPSTYVSSQPAAPNPILQGLYSFEGNQVVHCMCEQTNLMVDSQSNSTMMQPQDIFSNPQDSPGQSQLLQEPIIQSTYLESMPSNNQMRQGMDLDIQNPHSSSFLLYDHRYRSSESA 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03311 884 MobiDBLite consensus disorder prediction 702 740 - -
Viun7g03311 884 Pfam FAR1 DNA-binding domain 75 161 IPR004330 -
Viun7g03311 884 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 679 IPR031052 GO:0006355
Viun7g03311 884 MobiDBLite consensus disorder prediction 709 735 - -
Viun7g03311 884 ProSiteProfiles Zinc finger SWIM-type profile. 565 601 IPR007527 GO:0008270
Viun7g03311 884 Pfam MULE transposase domain 285 379 IPR018289 -
Viun7g03311 884 SMART 26again6 576 603 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03311 Viun-Chr7 35086292 35090374 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun7g03311 MULE 3.5e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03311 - K17604 gmx:100809803 1425.99