Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03303 ATGGAGGGCCCCAGTGAGATGGGTCTCATTGGGGAAAATTTTGATGCTGGTTTGATGGGGAGGATGAGGGACGATGAGTATGAAAGCCGCTCTGGAAGTGATAACTTCGATGGTGTATCTGGTGATGATCAGGATGGTGGTGATGATCAGCCACAGAGGAAGAAAAGATACCACAGACATACTCCTCACCAAATTCAGGAGCTTGAGTCTTTCTTCAAGGAGTGTCCTCACCCTGATGAGAAGCAAAGGTTGGATCTCAGTAAGAGGCTTGGGTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAGAACCGACGAACCCAAATGAAGACCCAACTGGAACGCCACGAGAACATAATGCTTAGGCAGGAGAATGATAAGCTCAGAGCTGAGAACAGTCTGATGAAGGAAGCAATGTCAAATCCAGTGTGTAACAGCTGTGGTGGCCCAGCGATTCCTGGCCAAATTTCATTTGAGGAGCACCAGATTAGAATTGAGAATGCTCGACTAAAAGATGAGTTGAACCGTATATGTGCCTTAGCAAACAAGTTCCTCGGCAAGCCAATCTCATCAATGACCGGTCCCATGGCTCTACCAACCTCAAATTCTGGTCTGGAACTTGGTATCGGAAGGAATGGGCTTGGTGGTTCAAGCACTCTTGGCACTCCCTTGCCAATGGGACTTGACTTGGGAGATGGAGTGTTGGGCACTCAAACTGCAATGCCTGGGATTAGACCATCACTGGGGTTGATGGGAAACGAAGTTCAGCTTGAGAGATCTATGCTTATAGATCTTGCGTTGGCTGCTATGGAGGAATTGCTAAAGATGACTCAGGCAGAGAGCCCTCTTTGGATTAAGAGTTTGGATGGTGAAAAGGAAGTGTTTAACCATGAGGAGTATGCAAGGTTGTTTTCTCCTTGTATTGGTCCTAAACCCACTGCTTATGTAACTGAAGCTACAAGAGAAACTGGGATAGTAATCATCAACAGTTTAGCCCTTGTGGAAACTTTGATGGACGCGAATCGATGGGCAGAGATGTTTCCTTCTATGATTGCTAGAGCTATCAACCTCGATGTCATATCCAATGGCGTGGGTGGAACAAGAAATGGTGCTCTACAAGTGATGCATGCTGAGGTACAATTGCTTTCACCACTAGTCCCCGTTCGTCAAGTGAGATTCATACGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTTGATGTTTCTATTGATATTGGTCATGATGCTGCTAATGCACAACCATTCATGAGCTGTAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCCAATGGTTACTCCAAGGTTACTTGGCTTGAGCATTGGGATTATGATGAGAGTGGTGTTCACCAACTTTATCGCCCATTGCTTAGTTCCGGTGTTGGATTTGGTGCTCATAGATGGATCGCCACTCTCCAGAGGCAGTGTGAATGCTTGGCCATCCTCATGTCCTCTTCCATTTCAAGCGATGATCACACAGCATTAAGCCAGGCCGGTCGGAGGAGCATGTTGAAATTGGCACAACGCATGACTAGTAACTTCTGTTCGGGGGTTTGTGCGTCGTCTGCACGCAAGTGGGACATGCTTCACATTGGAACTCTTGGTGACGACATGAAGGTGATGACTAGAAAAAACGTGGATGACCCTGGTGAGCCTCCGGGAATCGTGCTCAGTGCTGCAACTTCTGTTTGGATGCCGGTGTCACGGCAAAGGGTGTTTGATTTTCTGCGTGATGAACGGCTGAGAAGTGAGTGGGACATCTTGTCCAACGGTGGACCGATGCAGGAGATGGTACATATTGCCAAAGGACAAGGACACGGAAACTGTGTTTCTCTTCTCCGTGCCAACGCTGTTAATGCGAACGATAGCAGCATGCTGATCCTGCAAGAGACATGGATGGACGCGTCGTGCTCGGTGGTGGTATATGCGCCGGTTGACGTGCAATCACTGAACGTGGTGATGAGTGGTGGAGATTCTGCATACGTTGCACTCTTGCCTTCAGGCTTCGCCATTCTCCCCGATGGTCACTGCAACAACAACAGCAGCAGTTGCAATGGGACAATGCAGAAGGGTGGCGGAGGCGAAGACCGCGGCGGAAGCCTTCTGACGGTGGGGTTCCAAATTCTGGTGAACAGTCTCCCAACCGCAAAGCTCACAGTGGAGTCGGTGGACACTGTGAATAACCTGATTTCATGCACCATTCAGAAGATCAAAGGTGCTCTGAGAGTTGCATAA 2262 0.4854 MEGPSEMGLIGENFDAGLMGRMRDDEYESRSGSDNFDGVSGDDQDGGDDQPQRKKRYHRHTPHQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLMKEAMSNPVCNSCGGPAIPGQISFEEHQIRIENARLKDELNRICALANKFLGKPISSMTGPMALPTSNSGLELGIGRNGLGGSSTLGTPLPMGLDLGDGVLGTQTAMPGIRPSLGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEVFNHEEYARLFSPCIGPKPTAYVTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGVGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIDIGHDAANAQPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWDYDESGVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTSNFCSGVCASSARKWDMLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRVFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANAVNANDSSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHCNNNSSSCNGTMQKGGGGEDRGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKGALRVA 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03303 753 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Viun7g03303 753 FunFam Homeobox-leucine zipper protein GLABRA 2 263 486 - -
Viun7g03303 753 SUPERFAMILY Homeodomain-like 38 111 IPR009057 -
Viun7g03303 753 Coils Coil 105 140 - -
Viun7g03303 753 ProSitePatterns 'Homeobox' domain signature. 86 109 IPR017970 GO:0000981|GO:0006355
Viun7g03303 753 MobiDBLite consensus disorder prediction 1 61 - -
Viun7g03303 753 Pfam START domain 264 487 IPR002913 GO:0008289
Viun7g03303 753 Pfam Homeodomain 54 109 IPR001356 GO:0003677
Viun7g03303 753 MobiDBLite consensus disorder prediction 18 32 - -
Viun7g03303 753 ProSiteProfiles START domain profile. 254 490 IPR002913 GO:0008289
Viun7g03303 753 CDD START_ArGLABRA2_like 258 486 - -
Viun7g03303 753 SMART HOX_1 52 115 IPR001356 GO:0003677
Viun7g03303 753 FunFam Homeobox-leucine zipper protein HDG1 40 127 - -
Viun7g03303 753 SUPERFAMILY Bet v1-like 256 487 - -
Viun7g03303 753 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 750 IPR042160 -
Viun7g03303 753 Gene3D - 41 127 - -
Viun7g03303 753 SUPERFAMILY Bet v1-like 515 747 - -
Viun7g03303 753 SMART START_1 263 487 IPR002913 GO:0008289
Viun7g03303 753 CDD homeodomain 53 111 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03303 Viun-Chr7 35051063 35057227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03303 6 750 Homeobox Transcription Factor Family AT3G61150 61.804 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Viun7g03303 START 8.7e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03303 K09338 - gmx:100794400 1411.36