Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03277 ATGGTACCTTTATGTTCTGCGCGTGCGGGGGTGGGGGTCGGTCTCTTACGATGTGGAAAAAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGGTATCAAACGTGGCCCATTTACCAGTGAAGAAGAAAGCACAATTGTTCAACTCCATGGAATGCTTGGCAATAGGTGGGCTGCTATAGCATCCCAATTACCTGGAAGAACAGACAACGAGATTAAGAACTATTGGAACACCCATCTAAAGAAGCGTCTCCTTCGATCATGTCATTCCCTAAGAGAAAAACATTCATGTCTGGTTCTGGATCAAACTGTTGTCAAGTCAGAATCTCCTTCTACGCGTCACATGGTACAATGGGAAAGTGTAAGAGTTGAGGCAGAGGCAAGGTTGTCAATGGAATCCTCATTGCTCAATTCGTGGCCAAAGAGTTCGACATGCCCTGATCACTTTCTTCATCTTTGGCATTCTGAGGTTGGAAATTCATTTCGCATGGTCAAGGGAAAGGAAGGAGTTGTTGTGAGTCAAAGTCCTGTATCACATCCTTCATCTTCATCTAAATTGGAGTCTTGTTCAGATGTGTCATTGCAGGTGAAAAACAATGGAACTAGTAGCCTAAATCCATGCATTGAGGATGTGAACATGGTTCATGAACAGATAAGTAGCTACAAACCAAAGCTTGATGACACAGCTGGGTCTGACTCAGGCAATTATGAATTTCTTGATACTTCAGATTCTGCATTAAAGCACCTACTACACATGTCTGATGGTGATGTTGGATTCTTGGGACAGAATGATAATTTCTTGAATCTCCTTGATGCTACATGTGACCAAGATAGTTTCTTTCATATCTCTGCAGAGAAAGGCAATCTTTGA 873 0.4284 MVPLCSARAGVGVGLLRCGKSCRLRWINYLRPGIKRGPFTSEEESTIVQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSCHSLREKHSCLVLDQTVVKSESPSTRHMVQWESVRVEAEARLSMESSLLNSWPKSSTCPDHFLHLWHSEVGNSFRMVKGKEGVVVSQSPVSHPSSSSKLESCSDVSLQVKNNGTSSLNPCIEDVNMVHEQISSYKPKLDDTAGSDSGNYEFLDTSDSALKHLLHMSDGDVGFLGQNDNFLNLLDATCDQDSFFHISAEKGNL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03277 290 Gene3D - 38 85 - -
Viun7g03277 290 FunFam MYB transcription factor 38 85 - -
Viun7g03277 290 ProSiteProfiles Myb-like domain profile. 31 81 IPR001005 -
Viun7g03277 290 SUPERFAMILY Homeodomain-like 17 86 IPR009057 -
Viun7g03277 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 85 IPR017930 -
Viun7g03277 290 SMART sant 35 83 IPR001005 -
Viun7g03277 290 CDD SANT 38 81 IPR001005 -
Viun7g03277 290 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 217 - -
Viun7g03277 290 Pfam Myb-like DNA-binding domain 36 81 IPR001005 -
Viun7g03277 290 Gene3D - 7 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03277 Viun-Chr7 34939380 34941568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03277 13 264 MYB Transcription Factor Family AT3G61250 47.876 9.64e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun7g03277 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03277 K09422 - gmx:100782075 438.343