Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03258 ATGGCTGTGATCGATAGCCATGGCAACCCGCCGAGCGAGTCATCCGTTAAAGCTGAGGAGAATCCTCAAACACTATCTTCTCCGGAACCTGGTGCCACTGCGAAGGTGAAGAGAAAGAGAAAGAAGAGAAACGAGGGATCAAACGAACAGTTCCAGGCTGAGGTATGCCCTAAACCCTTAGTAGACTCACCATTTTCTCAAGAGGGAAATGTTGAAGCCGCTGCAGATAATGCTTGCCCAAACCCCAAGAAGAAGAAGAAGAAGATTAAGAATGTGCATGGTGAAGAACAGCTTCAGGCATCTGACCCTCCAATTGCGGTTTGTGTGGAATCCGATGATACAAAGGGAGAAGGAGCTCGACAAGGTGATCCTAATGGGAATGGAGATTTGCACCCTAAACCCTTATTAGATACACCGGTCCCAATTGTTTCCCGTGAGGAAAATTCTGAAGGAACTGCATTGAACCCTAACGCAACCAAAAAGAAGAGAAAGAAGAAAATTTTGCAAGTCGCAGAGGACACACGTGACCCTTCAATCCGGATAGGTGTGAAATCTGATGTTACGAAGGATGAAGGATCACGAGAAGGTTATGGTAATGATAGTGGGGCTTTGTACCCTAAACCCTTGATAGATACAGCAGTCCCAATTGTTTCCCATGAGGAAAATTCTGAAGCAACTGTACTGAACCCTGGCGAAACCCTAAAGAAGAAGAGGAAGAAGAAAATTTTGCAAGTTGCAGAGGACACATGTGACCCTTCAATCCGGATAGGTGTGAAACCTGATGTGACGAAGGATGAAGGATCACGAGAAGGTGATGTTAATGATAATGGGGGTTTGTACCCTAAACCCTTGGTAGATACACCAGTCCCAATTGTTTCCCATGAGGAAAATTCTGAAGCAACTGTACTGAACCCTGGCGAAACCCTAAAAAAGAAGAGGAAGAAGAAAATTTTGCAAGTTGCAGAGGACACATGTGACCCTTCAATCCGGATAGGTGTGAAACCTGATGTTACGAAGGATGAAGGATCACGAGAAGGTGATGTTGATGATAATGGGGGTTTGTACCCTAAACCCTTGGTAGATACAGCAGTCCCAATTGTTTCCCATGAGGAAAATTCTGAAGCAACTGTACTGAACCCTGGCGAAACCCTAAAGAAGAAGAGGAAGGAGAAGATTTTGCAAGGTGCAGGGGAAATATGTGACCATTCAATCCGGAAAGGTGTAGAATCTGATGTTACGAAGGATGAAGGATCACGAGAAGGTGATGTTAATGGGAATGAGGGTTTGTGCCCCGAACCCTTACTGGATACAAAAATCCCAGTTGTTTCCCATGAGGAGAATGCGGAGGGAACTGCACGAAACCCTAGCCCAACCCCCAAGAGGAAGAAGAGGAAGAAGAAGAAGATTTTGCAAGGTGCAGACGAAAAATGTGAGGCTTCAATCCGGATAGGAGTGGAACGTGATGTTAAGAAAGATGAAAGATCACAAGAAGGTGATGTTAACAAGAATGAGGGTTTGTGCCCTAAACCCTTATTGGATACACAAATCCCGATTGTTTCCCATGAGGGAAAGGCCGAAGGAACTGCACAGAGCCCTAGCCCAGCCCCCCAGAAGAAGAAGAGGAAGAAAAAGATTTTGCAAGGTGGTGATCAAATATGTGACCCTTCAATCCAGATAGGTTTGGAACCGGATGTTGCGAAGGATGAAGGATCACGAGAAGGTGATGTTAATGAGAATGCGGGTTTTTTCCCTGAACCCTTACTGGATTCAAAAATCCCACTTGTTTCCAAGGAGGAGAATGCTGAGGGAACCGCACGGAAGCCTAGCCCAACCCCCAAGAGGAAGAGGAAGAAGAAGATTTTACAAGGTGCCGAGGAAAAATGTGAGCCTTCAATCCTGATAGGTGTGGAAGGTGATGTTAAGAAGGATGAAGGATCACGGGAAGGTGATGTTAATGAGAATGAGGGTTTGTGCCCTACACCCTTACTGGATACACCAATCCCAATTGTTTTCCATGAGGAAAAGGCCGAAAAAACTCCACAGAGCCCTATCCCAACCTCCAAGAAGAAGGGGAAGAAAAAGATTTTGCAAGGTGCAGATCAAGTATGTGAACCTTCAATCCAGATAGGTTTGGAGCCTGATGTTGCGAAGGATGAAGGATCACGAGAAGCTGGTGTTAATGAGAATGGGGGTTTGTGTCCTGATCCCTTGCTGGATACAAAATCCCCAATTGTTTCCCATGAGAAGAATGCTGAGGGAACTGCACGGAACCCTAGCGCAACCTCCAAAAGGAAGAGGAAGAAGAAGATTTTGCAAGGGGCCGTGGAAAAATGTGAGGCTTCAATCCAAATAGGTGTGGAACCTGATGTTAAGAAGGATGAAGGATCACGGGAAGGTGATGGTAACGAGAATGAGGGTTTCTGCCCTACACCCTTACTAGATACACCAATCCCAATTGTTTCCCATGAGGAAAACGCCGAAGGAACTGCACAGAGCCGTAGCCCAACCCTCAAGAAGAAGAAGAAAAAGAAGATTTTGCAAGGTGCAGATCAAATATGTGACCCTTCAATCCAGATAGGTTTGCAACCTGATGTTGCAAAGGATGAAGGATCACAAGAAGGTGATGTTAATGAGAATGGGGGTTTGTGCCCTGAACCCTTACTGGATACAAAAATCCCAATTATTTCCCATGATGAGAATGCTGAGGGAACTGCACGGAACCCTAGCACAACCCCCAAGAGGAAGAGGAAGAAGAAGATTTTGCAAGGTGCCGGCGAAAAATGTGAGGCTTCAATCCGGATAGGTGTGGAACCTGATGTTAAAAAGGATGAAGGATCACTGGAAGGTGATGTTAATGAGAATGAGGGGTTGTGCCCTAAACCCTTACTGGATACACCAATCCCAATTATTTCCCATGAGGAAAAGGCCGAAGGAACTGCACAGAGCCCTAGCCCAACCCTCAAGAAGAAGAGGAAGAAAAAGGGTTTGCAAGGTGCAGATCAAATATGTGACTTTAGTCCAAATCCCAAGAAGGGGAATTTGCATGGTGCACAACAAATATGTGATCCTTCCATCCGGATAGGTTTGGAATCTGATGAGCCAAATGAAGAAGGAGGACATCAATGTTCTGATAGAGCTGAAAGAAGTACACAGAACCCCAACCCAACTCCCAAGAGAAAGAAGAGGAAGAATGTGCAAGGTCAACAGCAACAGCTTCAGATTTGCGACCCTTCAATCTCGATAGGTGTGGAATCTGATGTTATGAAGGAAGGAGCAAAACAAGTTGATGCTAATGAAGTTGGGGTATCAGGAATAAGTGAAGAAAGCCCTTTACCTGATTCCACAGCCCCAGAAGACACGCACCGTAAAAAGGATTCTGTGAGGAAAAAAAAGAAAGCCCTTAAGTCTCAAGGGGCTGAAGCAGAATCAGAACCAGAACCAAAGGAGTCCAATAGCACAGAGAACCCTCAACAGTGCACCCTGGACCTGAAACCGAAAAGTAAGGTGAAGAAAGGGCCAGGAGCCAACGCTGAGAACTCTGGAGTGTGTTCTAAACCTGAAGTGGCACCCCAATTATACATAGCAGCCACTACGGCCTTAGAAGTTAAAGAAAAGGCAGAGCTAATTGAAGTTAACATAGAGCATTCTGAAGCGGGTTCTAAACCTGAATTAGAGCCCTCAATAGACATACCAAGTCAAATGGAGCCCCGAAAGAAAAAAAGAATGAAGAAAGAAAAGAAAAAAGAGACAAAACCGAGTGAATCGCATGCACAACATCCTCAGCCTGAACCTTGTTCTAATCATGCACCTGCAGTTCGAGGAATAATTGAAGAATGCCCTGGACCTGAAGGGGCAGAATCCAGTGGCAAGCCACCTGAAACGGCAGTAGCACTCTCAATAGACCCTAAAATACCAGACCAAGCTTCCCCAAACGACACAGCAACCCCAATAGACCAAGATCAGAAGGTGAGTGAGAAAAAGAGGAAGAGTAATCCTGTAGCTGCTCCCTCAACAGAGCCAACAATTCAAACAGGCCAAGATCCCCCAGTAGACCCTGCAACCCCAGTAGACCCAGAACAGATGACGACGAAGAAGAGTAAGGAAAGTAACAGTGCACTAAAAAACGACGGGTTAAAATATGAGAAACGCAATGCTGATCTGAGAAAAAGTAATCCTGTAGCTGCACCGTCAATAGAGCCAACAATTCAAACAGGCCAAGATCCCCCCATAGACCCTGCAACCCCTGTAGACCCAGAACAGATGAAGAAGAAGGGTAAGGAAAGTAATAGTGCACTAAAAAACGATGGGTTAGAATCTGTGAAACGCAATGCTGATCTAACTGCAGAAACCTCAGTTCAGAAGATAGAAGGACCCACAGCTAAAAAATCTATGGTCAAACGCAATCCAGAGCGAGCTGCTAAAAACCCGGTTTATAGAACTGAGCGTCTCAAAGTCACTGAATCTCCCTCTAAACATCATGGTGGACGTTCCTTGAGTTGCGAGGCATGCCAACAGATTGGTCACAGATTAGAACAATGCAAGAGGTTGAGAACGCTTTCCAAGGATGAAGAAGTCTGCTTCTTTTGTGGGGAAATTGGCCATTCACTTGGACAATGTGGTGTCTCTCAAGCGGGGGGAAGGTTTGCGAAGTGCTTACTCTGTCATCAACATGGACACTTCGGCTATAACTGCCCCCAAAGTGAAAATGAAAAAAAGCATGAGGAGCTTGTAGCAAATGGGGCTTTCAATGGAAGTGAAATAAGGTTTGATAAATGCTCACTTTGTCATAAACGTGGGCACCACAGCCGTAACTGCCCCCAAAATGGTCATGATCCAAAGGTGCTCGCAGCCAATGGGGGCCATCAGCAAATGTCATGA 4878 0.4557 MAVIDSHGNPPSESSVKAEENPQTLSSPEPGATAKVKRKRKKRNEGSNEQFQAEVCPKPLVDSPFSQEGNVEAAADNACPNPKKKKKKIKNVHGEEQLQASDPPIAVCVESDDTKGEGARQGDPNGNGDLHPKPLLDTPVPIVSREENSEGTALNPNATKKKRKKKILQVAEDTRDPSIRIGVKSDVTKDEGSREGYGNDSGALYPKPLIDTAVPIVSHEENSEATVLNPGETLKKKRKKKILQVAEDTCDPSIRIGVKPDVTKDEGSREGDVNDNGGLYPKPLVDTPVPIVSHEENSEATVLNPGETLKKKRKKKILQVAEDTCDPSIRIGVKPDVTKDEGSREGDVDDNGGLYPKPLVDTAVPIVSHEENSEATVLNPGETLKKKRKEKILQGAGEICDHSIRKGVESDVTKDEGSREGDVNGNEGLCPEPLLDTKIPVVSHEENAEGTARNPSPTPKRKKRKKKKILQGADEKCEASIRIGVERDVKKDERSQEGDVNKNEGLCPKPLLDTQIPIVSHEGKAEGTAQSPSPAPQKKKRKKKILQGGDQICDPSIQIGLEPDVAKDEGSREGDVNENAGFFPEPLLDSKIPLVSKEENAEGTARKPSPTPKRKRKKKILQGAEEKCEPSILIGVEGDVKKDEGSREGDVNENEGLCPTPLLDTPIPIVFHEEKAEKTPQSPIPTSKKKGKKKILQGADQVCEPSIQIGLEPDVAKDEGSREAGVNENGGLCPDPLLDTKSPIVSHEKNAEGTARNPSATSKRKRKKKILQGAVEKCEASIQIGVEPDVKKDEGSREGDGNENEGFCPTPLLDTPIPIVSHEENAEGTAQSRSPTLKKKKKKKILQGADQICDPSIQIGLQPDVAKDEGSQEGDVNENGGLCPEPLLDTKIPIISHDENAEGTARNPSTTPKRKRKKKILQGAGEKCEASIRIGVEPDVKKDEGSLEGDVNENEGLCPKPLLDTPIPIISHEEKAEGTAQSPSPTLKKKRKKKGLQGADQICDFSPNPKKGNLHGAQQICDPSIRIGLESDEPNEEGGHQCSDRAERSTQNPNPTPKRKKRKNVQGQQQQLQICDPSISIGVESDVMKEGAKQVDANEVGVSGISEESPLPDSTAPEDTHRKKDSVRKKKKALKSQGAEAESEPEPKESNSTENPQQCTLDLKPKSKVKKGPGANAENSGVCSKPEVAPQLYIAATTALEVKEKAELIEVNIEHSEAGSKPELEPSIDIPSQMEPRKKKRMKKEKKKETKPSESHAQHPQPEPCSNHAPAVRGIIEECPGPEGAESSGKPPETAVALSIDPKIPDQASPNDTATPIDQDQKVSEKKRKSNPVAAPSTEPTIQTGQDPPVDPATPVDPEQMTTKKSKESNSALKNDGLKYEKRNADLRKSNPVAAPSIEPTIQTGQDPPIDPATPVDPEQMKKKGKESNSALKNDGLESVKRNADLTAETSVQKIEGPTAKKSMVKRNPERAAKNPVYRTERLKVTESPSKHHGGRSLSCEACQQIGHRLEQCKRLRTLSKDEEVCFFCGEIGHSLGQCGVSQAGGRFAKCLLCHQHGHFGYNCPQSENEKKHEELVANGAFNGSEIRFDKCSLCHKRGHHSRNCPQNGHDPKVLAANGGHQQMS 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1417 1431 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1 207 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1459 1494 - -
Viun7g03258 1625 Gene3D - 1492 1548 - -
Viun7g03258 1625 SMART c2hcfinal6 1591 1607 IPR001878 GO:0003676|GO:0008270
Viun7g03258 1625 SMART c2hcfinal6 1550 1566 IPR001878 GO:0003676|GO:0008270
Viun7g03258 1625 SMART c2hcfinal6 1525 1541 IPR001878 GO:0003676|GO:0008270
Viun7g03258 1625 SMART c2hcfinal6 1499 1515 IPR001878 GO:0003676|GO:0008270
Viun7g03258 1625 MobiDBLite consensus disorder prediction 866 924 - -
Viun7g03258 1625 ProSiteProfiles Zinc finger CCHC-type profile. 1591 1607 IPR001878 GO:0003676|GO:0008270
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1213 1442 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 937 1188 - -
Viun7g03258 1625 SUPERFAMILY Retrovirus zinc finger-like domains 1546 1609 IPR036875 GO:0003676|GO:0008270
Viun7g03258 1625 Coils Coil 1124 1144 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1460 1491 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 329 359 - -
Viun7g03258 1625 Gene3D - 1549 1614 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 255 289 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1361 1388 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1132 1149 - -
Viun7g03258 1625 SUPERFAMILY Retrovirus zinc finger-like domains 1493 1542 IPR036875 GO:0003676|GO:0008270
Viun7g03258 1625 MobiDBLite consensus disorder prediction 258 272 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 395 623 - -
Viun7g03258 1625 PANTHER OS04G0555800 PROTEIN 1588 1620 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 470 500 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 8 30 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 636 651 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 166 196 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1334 1348 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 635 849 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1601 1625 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 786 801 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 1029 1044 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 333 351 - -
Viun7g03258 1625 MobiDBLite consensus disorder prediction 395 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03258 Viun-Chr7 34827535 34835082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03258 1424 1606 C2H2 Transcription Factor Family AT5G20220 25.253 2.73e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03258 - - vun:114191056 3029.58