Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03257 ATGGTTAGCCAGAGGCAGCGATTGGCTCGCAAGCGATTCAAAGCAGAGCATCCTGAACTGTTTCCGAAGGCCGAGCCCACACCCCCCAAAGACCCTAGCAAGAAGAAGAAGAAGAAGAAGAAGAGTAGCGCGTTCAAGCCCAAACGGGCCGAGTCAAAACCCGGCTCCGGGAGAAGACACCCTCTTAGAGTACCCGGCATGAAGCCCGGCGAGAGCTGCTTCATCTGCAAGGCCCCGGACCACATCGCCAAGCTATGCCCCGAAAAGACCGAATGGGAGAAAAATAAGATATGTTTACGGTGTCGTCGACGCGGTCATAGAGCTAAGAACTGCCCCGAGGTGCAAGATGGCGCCAATGATGTCAAATATTGCTATAACTGTGGGGAAACTGGCCACTCTCTCTCGCTCTGTCCGTACCCTCTTGAGGAAGGAGGGACAAAGTTTGCCGAGTGCTTTGTCTGTAATCAGCGGGGACACTTGAGTAAAAACTGTCCTCAAAATACTCATGGCATTTATCCAAAGGGTGGTTGCTGTAAAATTTGTGGTGGTGTTACACATTTGGCGAAAGATTGTCCGGACAAAGGACTGCGAGGATCTGTTGCTGGTAATGGCCCTGCTGGTAGATCAATGAGAATTGAAGAGGGTCCAAGGGGCAAGGTTACCAAATTTATTAGCGGTGATGATATTGAGGATGACTTCATGATGGATGACATACGCAGTGGCGATAATAACAAGTCAGCAAATTCAAACAATGGCAATGTAAAAACAACGAAGAAAGATCCTAAAGTTGTGTTCTTTAACTAA 804 0.4863 MVSQRQRLARKRFKAEHPELFPKAEPTPPKDPSKKKKKKKKSSAFKPKRAESKPGSGRRHPLRVPGMKPGESCFICKAPDHIAKLCPEKTEWEKNKICLRCRRRGHRAKNCPEVQDGANDVKYCYNCGETGHSLSLCPYPLEEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDCPDKGLRGSVAGNGPAGRSMRIEEGPRGKVTKFISGDDIEDDFMMDDIRSGDNNKSANSNNGNVKTTKKDPKVVFFN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03257 267 Gene3D - 121 172 - -
Viun7g03257 267 MobiDBLite consensus disorder prediction 202 223 - -
Viun7g03257 267 SMART c2hcfinal6 72 88 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 SMART c2hcfinal6 123 139 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 SMART c2hcfinal6 97 113 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 SMART c2hcfinal6 150 166 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 SMART c2hcfinal6 177 193 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 MobiDBLite consensus disorder prediction 12 32 - -
Viun7g03257 267 MobiDBLite consensus disorder prediction 1 66 - -
Viun7g03257 267 MobiDBLite consensus disorder prediction 241 257 - -
Viun7g03257 267 PANTHER OS04G0555800 PROTEIN 1 267 - -
Viun7g03257 267 SUPERFAMILY Retrovirus zinc finger-like domains 66 114 IPR036875 GO:0003676|GO:0008270
Viun7g03257 267 Pfam Zinc knuckle 151 166 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 Pfam Zinc knuckle 123 137 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 ProSiteProfiles Zinc finger CCHC-type profile. 151 166 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 MobiDBLite consensus disorder prediction 238 261 - -
Viun7g03257 267 SUPERFAMILY Retrovirus zinc finger-like domains 117 167 IPR036875 GO:0003676|GO:0008270
Viun7g03257 267 ProSiteProfiles Zinc finger CCHC-type profile. 98 113 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 Gene3D - 66 120 - -
Viun7g03257 267 ProSiteProfiles Zinc finger CCHC-type profile. 124 138 IPR001878 GO:0003676|GO:0008270
Viun7g03257 267 FunFam Zinc finger CCHC-type-containing 9 148 198 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03257 98 199 C2H2 Transcription Factor Family AT5G20220 28.571 1.04e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03257 - - gmx:121174300 426.787