Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03241 ATGCATAGCAACTCCTTCAAAAACCCTAGATCCTCTTCACTCTCTTTCACTGCACTTTCTGGTGTTAGGGTTTCTCCGTCAATCAGCGCCAGAGATATGGCTCCCAAACCGCCCAGTACGGGCCTTTTCGTTGGACTGAACAAGGGTCACATCGTCACCAAGAAGGAATTGCCTGCACGCCCCTCAGATCGCAAGGGGAAAACAAGCAAAAGGGTGCACTTTGTGAGGAATCTCATAAGAGAGGTTGCTGGTTTTGCTCCATATGAAAAGCGTATAACTGAGTTGCTTAAGGTTGGGAAGGATAAGAGGGCACTTAAGGTTGCCAAGAGAAAGCTTGGAACTCACAAACGTGCCAAGAAGAAGCGTGAGGAGATGTCCAACGTTCTCCGAAAAATGAGGGCTGGTGGAGCTGGAGACAAGAAGAAATAA 429 0.4802 MHSNSFKNPRSSSLSFTALSGVRVSPSISARDMAPKPPSTGLFVGLNKGHIVTKKELPARPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03241 142 Gene3D 60S ribosomal protein L36 32 139 IPR038097 -
Viun7g03241 142 MobiDBLite consensus disorder prediction 111 142 - -
Viun7g03241 142 MobiDBLite consensus disorder prediction 119 142 - -
Viun7g03241 142 Pfam Ribosomal protein L36e 40 133 IPR000509 GO:0003735|GO:0005840|GO:0006412
Viun7g03241 142 MobiDBLite consensus disorder prediction 27 47 - -
Viun7g03241 142 PANTHER 60S RIBOSOMAL PROTEIN L36 26 140 IPR000509 GO:0003735|GO:0005840|GO:0006412
Viun7g03241 142 FunFam 60S ribosomal protein L36 33 138 - -
Viun7g03241 142 ProSitePatterns Ribosomal protein L36e signature. 87 97 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03241 Viun-Chr7 34645321 34647017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03241 39 142 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 82.692 4.00e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03241 K02920 - gmx:100785591 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03241 7 34645321 34647017 Viun7g03241 7 34645321 34647017 ECH