Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03237 ATGCCAGTTGCAAAACTCCCGGCCTCAGGCACAACCGGTTTCACAAAAACAGATGATGGAAATGATTCTTTAGATACAATATTCAGACAAGCAATTGGAAAAGAACCTTTGCTTTCCTTTCCTAGGGCCGGTGACAGCCCAGTACAGTGGATTCAATTACTTCATGCTTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTACAAAAGTGCAACAAGTGTTCTCGAGAATTTTGCTCTCCCATTAACTATAGAAGGCACATACGTGTGCAGCACCGGTTGAAAAAGCTTGATAAGGATTCTAAAAAGAATAGGGAACTTTTAGGGGCATATTGGGATAAGCTCTCCATAGAAGAGGCAAAGGAAGTTGTTTCATTCAAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAGAAGCTTTGACAACTCTTAGAAAACAAGGATTTTCTTCTCTTCCACAGTATTATCTGAGGGCTGGTTCTGCCCTTTTGAATATTGTTCAATCCAGGCCATCTAGTTTTCCTATATCTTCCCAAGAGTTGTTCAGTATCCTAGATGATTCTAGTGAAAAAACATTTTTGGTTGGATCGGCAGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCCGGAAAGATTGGTCTTGAACAAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAACTGGTGAAGGCTTGGCTTGCTGACAAGGATGCTGAAGCATTGAGATGCCAAAAGCTACTTGTGGAAGAGGAAGAAGCTGCTCAGAAAAGAAAAGCTGAGATTTTAGAGAGGAAACGCCAGAAAAAGCTCAGACAGAAAGAACACAAGGCAAAGGAGCAAATTGAAGACGACACAGAAACTAAAGGGAACATAAGCAGCGCAGGAGAGGATGTATCACCAGGAGAAGCATCTTTGGGTACATGTGACTTCGATGCACATAATCCAGATATATTTGCGGATCATTCTCCTCCACCACATGTAACTTCTCACTGCCTAGACACTAATGAAGTTATAGAAGGGGATACGCCGTCAGGGTATGATGATTGTGACACTGATCAGTATATAGAGCGGCAGACATTACAAGGACATAATCGCCGGGGCACAATGCCTGCCAGATGGCAAGGGCTACCAAAATCCCAATGGGCAAGAGCCAATGGTTTGAATGCAGGCCAAAATTCTCAACTGTCGAAGCTTGGAGTTAATCAAAAGCATAGAACCAGCCATGATCTTAGGGTAGCTCCTATAATCAATGGCAGTAAGGTTTGGAGTCGAAAACCTAAAGCAGAATCTAATGCTGTGGTTCTAAAAAACAAAATGCTGAAAGAACCAGACAAAGTTAAAAATCATGAAGTTTTGATAGGATCTGTATCGGTTAGTCTGGGTAATTGCTGCCCTTCCGGAGGTAATTCTATGGCACCCCAGCGGGATTGCTCGGCAGGGAATCTGTCCAAGCTGAATACTGCTCAGGAGAAACCAGGAAGCAACGGTCGTTTAACAAAGTTTTGGAGGCCTGTTAGCCAGCATGGAACTAAAGAGTCATTTCCACTTCAAAATGGTGGGACAGAAGCTGATGTTATTAATGGGAAAATTGATGAAAATTCGTCTGGTCAAAGTAGTTTAAGGTTGTGTAGTGTAGAGGGTAATGATGATATTGATTTTGGGGACAATTTTTCCCATAATGTGGCAAAAGTAGATACAGACAGCTTACGTCTGTCCAGCCTTGCTGCAAAATCCTTTCTTGCCCAAAGATGGAAAGAAGCTATCTCGTCAAACCATGTAAAATTGGTTTGCACACCTGATTCTGAGCCTCAGCCTCGTGGAGCACAGTCTGTCCAGGATTGTGATACAGAGAACCGGTTGCCTGCAACCTCTGGAGTAGCAAGATCTAAACCCAAAACGAAGCCTGAAAAAGGAATGAAGATAAAGTACATTCCCAAACAAAAAGCAGCAGTCTAG 1995 0.4281 MPVAKLPASGTTGFTKTDDGNDSLDTIFRQAIGKEPLLSFPRAGDSPVQWIQLLHALDQQELPGWPLLSPVKVQLQKCNKCSREFCSPINYRRHIRVQHRLKKLDKDSKKNRELLGAYWDKLSIEEAKEVVSFKNVMLEEVPGSSILEALTTLRKQGFSSLPQYYLRAGSALLNIVQSRPSSFPISSQELFSILDDSSEKTFLVGSAVSMQRYVFDGEAGKIGLEQKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRKAEILERKRQKKLRQKEHKAKEQIEDDTETKGNISSAGEDVSPGEASLGTCDFDAHNPDIFADHSPPPHVTSHCLDTNEVIEGDTPSGYDDCDTDQYIERQTLQGHNRRGTMPARWQGLPKSQWARANGLNAGQNSQLSKLGVNQKHRTSHDLRVAPIINGSKVWSRKPKAESNAVVLKNKMLKEPDKVKNHEVLIGSVSVSLGNCCPSGGNSMAPQRDCSAGNLSKLNTAQEKPGSNGRLTKFWRPVSQHGTKESFPLQNGGTEADVINGKIDENSSGQSSLRLCSVEGNDDIDFGDNFSHNVAKVDTDSLRLSSLAAKSFLAQRWKEAISSNHVKLVCTPDSEPQPRGAQSVQDCDTENRLPATSGVARSKPKTKPEKGMKIKYIPKQKAAV 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03237 664 Coils Coil 272 292 - -
Viun7g03237 664 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Viun7g03237 664 MobiDBLite consensus disorder prediction 278 319 - -
Viun7g03237 664 MobiDBLite consensus disorder prediction 612 664 - -
Viun7g03237 664 MobiDBLite consensus disorder prediction 616 636 - -
Viun7g03237 664 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 104 IPR013087 -
Viun7g03237 664 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 662 - -
Viun7g03237 664 MobiDBLite consensus disorder prediction 287 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03237 Viun-Chr7 34614812 34621108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03237 19 661 C2H2 Transcription Factor Family AT4G25610 44.615 1.57e-153 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Viun7g03237 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03237 - - gmx:100799153 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03237 7 34614812 34621108 Viun7g03237 7 34614812 34621108 ECH
Viun4g02148 4 36969271 36972940 Viun7g03237 7 34614812 34621108 PCT