Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03212 ATGTCGTCGCCGGGGTTCCCTGCTGCTGGTCCCTCCGATTTCTACGGCGGAGCAACCGGATTCCCTACTCAATCCATGGCAGTTCAACCCACCATCAACAACCACCCCGCCACCACTCACCACCCTCTCTACCGATCCCAACCTTCAATTTTGCTTCATCCATCCTCCCACATACCTCAACACCAAACATCCTCTTTCATCGGGAAACGCACACTCGCAGAATTCCAGACCCAAAACCTCACTAACACCAACAACGTTGTTATGAGCAACAACAATAACCAACTCCTTCCTAACTATCAATTTCGTTCGGTAAAGCCCAGAACTTTTCAACACAACCGATTCTCCACGTTCTCTCCTGAATTATCTGCCTTACCGTCACACCGTTACGGCGCCTCCCTCCTCCACCACATTCGCCCTAACGCTGTTAACGCACAACCAGTCACGACTCCGATCCTGTCTCACACAAATTTCTTTCCGGTTCAAGGCAGGGTAACCGCGACCCATGAAACGGAGAAGACGTCGATAGACCACCGCCTCCAGGAGTTGGAAAAAGAGCTTCTAGAAGACAATGATGACGACCAAGGCGACGCCGTTTCAGTCGTGACCTCCTCTGAATGGTCACACACAATACAGAACTTAATCACTCCGCCCAAACGCGCCTCGTCATCGCCCTCTTCCTCTACGACGTCGTCCAACTCCTCCGCAGAATCCATCAGTGTCATACAGTGCCTAACGGAGGTCGCGAAAGCAATTTCAGAAAGGAGATTCGAGGTCGCGACGCAGATCCTTGCCCGATTGTCGCAGAATTCGGATCAACGCTTCGTAAATTGCATGGTTTCCGCGCTCAAGTCGCGGATGAGTCACGCTGAGTATCCACCACCGGTTGCGGAATTGTTCAGCAGGGAACACGCCGAGTCCACTCAGTTGCTATTTGAACACTCGCTCTTTTTTAGGGTTGCGCTCATGGTCGCCAACATCGCAATCCTCGAATCCGCATTCGATGATAAAACAGATAACGCCAAACTCTGCGTGGTGGATTTCGACATCGGGAACGGGAAACATTACGCGAGCCTTCTCCACGAGCTCTCCTTGCGGCGAAAGGGCTCTCCGGCCGTCGTCAAGATCATAGCCGTTACGGAGAACAGCGCTGACGAGAGGATGAGTTCCGCGGGCGTGATGCTCGGAAGACTCGCAGAGCAACTCGGGATTGGTTTCGAATTCAAAGTGCTGACTCGGAGAATCGACGAGTTGACTCGTGAGTCTCTGGGTTGCGACGCGGACGAGGTGCTGGCGGTGAATTTCGCGTTCAGGCTGTACAGAATGCCCGACGAGAGCGTCTCCACGGAGAACCCACGCGACGAACTTCTGCGGCGCGTGAAGGCACTCGCGCCGCGCGTGGTGACGCTGGTGGAGCAGGAGTCGAACACCAATACGGCGCCCTTCGTGGCTCGCGTGGCTGAGTCGTGCGCGTATTACGGCGCGCTGTTTGACTCGCTGGACACGACGATGACACGGGAAAACTCGTGGCGAATAAAAATGGAGGAGGGACTGAGTCGGAAGATAGCGAACTCGGTGGCATGCGAAGGAAGGGACCGCGTGGAAAGGTGCGAGGTGTTCGGAAAGTGGCGCGCGCGCATGGACATGGCTGGTTTCAGGTTGAAACCACTGAGTCAGAGAGTCGCTGAGTCAATCAAAGATCGACTCGGTGATGAGAACCGGGTGGCAGTAAAAGTAGAAAAGGGTGGGATTTGCTTTGGGTGGATGGGAAGAACCCTGACCGTGGCTTCTGCTTGGTGTTAA 1800 0.5439 MSSPGFPAAGPSDFYGGATGFPTQSMAVQPTINNHPATTHHPLYRSQPSILLHPSSHIPQHQTSSFIGKRTLAEFQTQNLTNTNNVVMSNNNNQLLPNYQFRSVKPRTFQHNRFSTFSPELSALPSHRYGASLLHHIRPNAVNAQPVTTPILSHTNFFPVQGRVTATHETEKTSIDHRLQELEKELLEDNDDDQGDAVSVVTSSEWSHTIQNLITPPKRASSSPSSSTTSSNSSAESISVIQCLTEVAKAISERRFEVATQILARLSQNSDQRFVNCMVSALKSRMSHAEYPPPVAELFSREHAESTQLLFEHSLFFRVALMVANIAILESAFDDKTDNAKLCVVDFDIGNGKHYASLLHELSLRRKGSPAVVKIIAVTENSADERMSSAGVMLGRLAEQLGIGFEFKVLTRRIDELTRESLGCDADEVLAVNFAFRLYRMPDESVSTENPRDELLRRVKALAPRVVTLVEQESNTNTAPFVARVAESCAYYGALFDSLDTTMTRENSWRIKMEEGLSRKIANSVACEGRDRVERCEVFGKWRARMDMAGFRLKPLSQRVAESIKDRLGDENRVAVKVEKGGICFGWMGRTLTVASAWC 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03212 599 ProSiteProfiles GRAS family profile. 231 599 IPR005202 -
Viun7g03212 599 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 221 590 IPR005202 -
Viun7g03212 599 MobiDBLite consensus disorder prediction 20 39 - -
Viun7g03212 599 MobiDBLite consensus disorder prediction 211 233 - -
Viun7g03212 599 Pfam GRAS domain family 241 598 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03212 Viun-Chr7 34515341 34517495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03212 33 598 GRAS Transcription Factor Family AT5G52510 46.203 7.83e-144 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun7g03212 GRAS 2.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03212 - - vra:106769615 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03212 7 34515341 34517495 Viun7g03212 7 34515341 34517495 ECH
Viun4g02111 4 36610853 36613253 Viun7g03212 7 34515341 34517495 PCT